G131816


Basic Information

Item Value
gene id G131816
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2263657 ~ 2264623 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165321
TATacttcatttctttatttagaaGTGAATCACATGACCCCTCCCTGCAGACCACCagtttaataacacattttactggGAAGACACAGATTCTGTATAGATTCTGACACACATTCTGTATTTACAGTCAACTtagacttaaaaaaattaattcaGTGAAAAGGATATGCAatgaataatactaataaaagttattaataaaacagcttttataaaataaatacctaaaacAGAGTATATAATACTCCGACACCCTCCCTGCCCCTTCTCCTGCGGGGACGTCCTATCCTATGTGCTCTGCTCTCATTGGCTGGCTGCACCTCTGTGGCCGTAGGAACGGACCAATTGTACGAGCCAGGCCAGGAACTGATGCCCACCTCCCCCCCAGCCCTGTTCTCCAGGACTCCATTAGgactgtaattgaactaatcactTTAAACCCTAACAAatgtcctctctctccttcgCTTGCCTGCCTACTctccaaccccccacccccctctttctctctctctcacaggccCTGTCTGTCTCGCAGCATGTAGCGGCTGGCGGCCTGCAGGTCCCAGTGGTATTTGTTCAGGATGCGCTGGCAGTCTTCTCTGGAGCGCCGGCTCATGAAGTACAGGTGCTCTGTctgagagagtgagagggcagggagggggtggagagggaggaaggggaaagaaagagagagagatcttgTGAGATTGTGATGATGAaagttgtgtgtgcgtgtgcgtgtcagtAAGCAAGACAAACTGTCATTAGAGAGATCTCGAAATGACCATTTGGCGTGCTATaggacagacgcacacagatacacacacagatagacagagacagacagacgcacacagacagacagacccacacagacagacagacagacagacagacgcacacagatacagtgagggaaaaaagtatttgatcccctgctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165321 True 945 lncRNA 0.47 2 2263657 2264623

Neighbor

gene id symbol gene type direction distance location
AMCG00011675 NA coding upstream 28844 2233395 ~ 2234813 (+)
AMCG00011668 NA coding upstream 115569 2147132 ~ 2148088 (+)
AMCG00011669 NA coding upstream 167256 2088515 ~ 2096401 (+)
AMCG00011663 NA coding upstream 188319 2073333 ~ 2075338 (+)
AMCG00011665 NA coding upstream 192546 2069068 ~ 2071111 (+)
AMCG00011674 NA coding downstream 12809 2277432 ~ 2287598 (+)
AMCG00011685 LOC106602896,LOC106560692,LOC100693841,LOC105007919,LOC103365478,LOC107384710,LOC101477102,LOC107098142 coding downstream 25224 2289847 ~ 2296304 (+)
AMCG00011686 NA coding downstream 56787 2321410 ~ 2322699 (+)
AMCG00011688 NA coding downstream 75132 2339755 ~ 2342581 (+)
AMCG00011687 NA coding downstream 102610 2367233 ~ 2371901 (+)
G131813 NA non-coding upstream 16483 2246952 ~ 2247174 (+)
G131786 NA non-coding upstream 34699 2154801 ~ 2228958 (+)
G131768 NA non-coding upstream 203922 2058665 ~ 2059735 (+)
G131767 NA non-coding upstream 207196 2055162 ~ 2056461 (+)
G131705 NA non-coding upstream 384367 1866781 ~ 1879290 (+)
G131891 NA non-coding downstream 34201 2298824 ~ 2299112 (+)
G131892 NA non-coding downstream 34526 2299149 ~ 2299461 (+)
G131893 NA non-coding downstream 35720 2300343 ~ 2300573 (+)
G131908 NA non-coding downstream 62497 2327120 ~ 2327732 (+)
G131941 NA non-coding downstream 197522 2462145 ~ 2462350 (+)
G131805 NA other upstream 51155 2207901 ~ 2212502 (+)
AMCG00011671 NA other upstream 77784 2166167 ~ 2185873 (+)
AMCG00011670 NA other upstream 120644 2125741 ~ 2143013 (+)
AMCG00011661 NA other upstream 212117 2043597 ~ 2051540 (+)
AMCG00011664 NA other upstream 249028 2000467 ~ 2014629 (+)
G131898 bola2,LOC105020731,LOC105907194,LOC108436240,LOC104959592 other downstream 53387 2318010 ~ 2320033 (+)
AMCG00011695 NA other downstream 186740 2451363 ~ 2461725 (+)
AMCG00011702 NA other downstream 277172 2541795 ~ 2551037 (+)
G131981 neurl4,LOC102791343 other downstream 350830 2615453 ~ 2616061 (+)
AMCG00011713 LOC107377402,LOC101163851,LOC108249525,LOC106525311 other downstream 426916 2691539 ~ 2700390 (+)

Expression


Co-expression Network