G134244


Basic Information

Item Value
gene id G134244
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9535268 ~ 9538892 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168464
TTCTTAAGAAAccagtggttttattttctttataataccgtggaaaaataattacatacattttgaaaaaaatatcataaaataaaataaaagacactcCTTTATGAGAACATACAGTATCTTATAAACTGAGCAGAAAAAGAGAGTCCATACTGAGCTCCTATGGTTAAGATACTGGAAAGACGAgcaaaaaatcaaatcaatttgaaaataacaaaccaaccaacaaacaaacaaaaataatgatccaTCTAAAAGGTGCATACAtagaatgtgaaataaaatcaaattaaacaaacaaaaaacaagaaataaaataatgtgactGTTTGATTTAAAGAAGTgccattttattactttttgtttcttttttccaatCATTTCAGAATATTGAGTCCTTTTTTGGTGACCAAACTAAAATGCAATCTGCTTGCTACCGTTTTTTTCTCCTGTAGTGTGAGAATTACCCCTCTAGTTGAATCTTAAAATAGCCAACTGGTGTTTGtgatacagtacaatacagggGAGTTAGAATGTGATTTCTGCAggttcagtttttaattttgcacaCCAGTGTGGGCTGCGTTACACAAATCAGTTCTTCCAAAAGCACCAACAGCCAGCCTAATTGAGATGTCTCTCCTCCATAGTTATCATTATAAGATGAGGGCAAACATTTTCCATCTCCAGCAGAAGTACAGCTGCATCACAGTACCTTGTTTACATGgcatttgaaatgaaatcaaaGCTTGAAATGATGCCAAAACAACTCATTACTGGCAGCTAATGATCTTATGCTccgaggtgtgtgtgtttgtaggcaGGAATGCGAGTCTTTGAAACCGTGTACAACTAAGATCAGTTCCCCATCCGAAAAAGGACTCAATCTTCTGAATCTTTTGCTTCTTCTAAACATAAGGCCACACTCACAACATTGCCCTGTTCTGTCCAACTGTCTGTAGCACTTCCTCATGTATTGCTTATGCTTCTAAACTATGGTCAGACAAACCATTGAacgaaatacatatttttcctttttttgattTATTGACTTTTTACTGTAAGCGAATGAGGCTGTAAAGTTCAGTGTCCTtcaacagattattttattaaagcatcTCATTTTCTTCACAAGAATATCAAAGGCATTTAtatcctttgtgtgtgtgtagtgggaGAGTATTATGGGTATTCAATTTGCTGTACCCAATATACTGAGCTACCTAATCGGCAGGTACAGACAGCTGTGCTTACATAGACCACAGTTCCTAAATCTGCAACTGCATTCGATACTAGTGTGTGGGTTACTGTTAACTCCACCACAGTTCTGCTCATTaacatgaatgtgttttgtaGTAAATATCAGCATAGCAAAAATATTGTGCCGGCCCAGATACCCTTCTGTGCAATACACTGCACTCCTTGAACAGTCTAACAGAGCGACGTGGCGCTCTCAGTTCACCTTCGAAAAGATAAATGGGTCCTGTGTCACATCTGAGATCTGCTCAGGATGCAAACAGGCCCAAAGCTGGTGGTTGCAGTGGAGCTACATTAAAAATTACAGCTTCATTTTTGTCGCTTACAGTAAAACACGCCCGAATAACAACAACGTAACAGTAAATTCAATATACAGAAAATTCTTCAAGACACGCGTCGTaccaatagtaataatacaaaagtataGTAGTGCATataaatatttctttttttttgttcgtttttatgttttttttttcatcagatGTACACAGGtcattttttatagtttttgtttgttttccactttttgTTCATTGTCTTCGTCattcagaatacaaaataataacgataataacagtaataaaacataGTCATAATATttaccataaaataataataaacgggAACAGTACACTTTTcgaaaaaaaacagacaaaacaaaagaaacgaAACCGAAAAGAAAACGGGAATGTCGGTGACGTATTTACAAGGTCCTGGAAGATGTCAGAAAACATTGGAAGTTGTTGGCTTAAGAGAAGGTTATATCTGCAGGTACCTGCTTTAACGCACGCAAGTCAACTCAGCAAGAGTGAAGTGAACAATGTCaaaaatttaaataagaaaacaccCAGAAGCTGCCCTGCCACCCCCCCCAATTCGCCCTATTTGAAAGTTGCAAGAAAGTGCTCGGTTGCACATTCCCTGCCACACAAACTGCACTTGCAACTGGACTGGGGCACCTGAAACAGCCATTTAATAAATGagtttaaaaattatatataagaaaatgaCATTGACTTATTTATTGAATTCTTGACTTTCCCCATAGAGAAACTAGAATTAAAActctttccttttaaatgtatctcTTCCGTTGTAATATGTGCTCAGCCATAAAACTCAATTCACCTCCTCCCGAACGACGCAAACGGAATGGGAATGGAGTCAACGGCACTTCAGATTGCCACGGCTAGTTTTTGTATCCCCTGAACCCTGACGTCATACACTCATGGGTAGCTGGACACAATCTCGGGCCCTGGTATACTGATCTGAGCCTGCGGACAACCTGACTGTCACAGACGACAACCCAGACGGGATGCTCTTAACAGCCtctatatgttgttttttgaatgACTGGTGCAAAGCACAATCTTTGGGGGTTCTCAGCAAAGTCTTTGCAAGTTATCCTGAGGGATTGTCAAGAGGCTGTCTTTGTCCTTGtgcaggggggaaaaaaaaacaaaaaacaaacaaaggatgCCTTGTTTGTGATCAATCGTCGTATCattctgttttgtgttctgttctAGGCAGGCGCTGGCTAGAGGGGAATTGCTGGCCTTGTACAAATGGAAAGAATGTGAAATACTGAGTAGACAAGGCTCGTTTTTAACAGAGCAGGTCAGCCTAGGCCAGGATTGGGCTTCCCGAGAGACCTCCGGAATGCAGCTTTGTTATCGGATTCTCCCCCATTGTGGCCTCCTACGCTGACAATCGAGTGCTGAAAGACTTTACGAAACCCTGCTGCTGTTGAAGGTACCAACACAAGAAGGATAAAGGGATAAGTACgcatacagtacagtacctgGCTAGAAACTTCGAGCTAAAGTGGGCCGGGGGTTAATTCTCATTAAGGTCACGTGTGAAACAGGTATACTGTTCAGCTTCCCGACAACATTATAGAGACAGCACTCACCTGTGCAGTGAGGGTGACCAAGCTGATAAAGCTCTTGTTGAACAGTAATAGGGGAGAAAATATTTCCCCCTATGAACTGTAACATGAAATGAATGTGACAGGCTCTAAAGAAGCAGAATTGTCTTCAGACACCTAGGTATACAATGATGAGTAACAGAGTACGGTATATTTTTTCCACCTTGCCTATAACAATGTTCGTCGATGCAGTAATTCCATTTTTATGAAAACTCACCAGGGTTTGATACAAATCCCTcccaaaaaatgaaacaaaggaTTTAGATACTCGTGTTTTGATCACCACGCTTCCATGTTACTTCAGCCACACCTTTCACATCTCCAGTTTAAGCATTGCAAATACAGTATATGTCTTTCCttccaaacacaacaaaaacccATTTTCACCTCAAGTCAACTCCATTGCTCCAGGCATCGAGAGCTGAAGTTTGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168464 True 3625 TUCP 0.39 1 9535268 9538892

Neighbor

gene id symbol gene type direction distance location
AMCG00012053 NA coding downstream 136859 9384426 ~ 9398409 (-)
AMCG00012054 NA coding downstream 162587 9361028 ~ 9372681 (-)
AMCG00012050 NA coding downstream 201277 9321611 ~ 9333991 (-)
AMCG00012051 NA coding downstream 237694 9291483 ~ 9297574 (-)
AMCG00012045 copa,LOC106600386,LOC102794619 coding downstream 339559 9178467 ~ 9195709 (-)
AMCG00012068 NA coding upstream 13669 9552561 ~ 9553607 (-)
AMCG00012066 NA coding upstream 16301 9555193 ~ 9556954 (-)
AMCG00012064 NA coding upstream 18605 9557497 ~ 9560627 (-)
AMCG00012062 NA coding upstream 30736 9569628 ~ 9578057 (-)
AMCG00012065 NA coding upstream 40664 9579556 ~ 9596492 (-)
G134226 NA non-coding downstream 118810 9414316 ~ 9416458 (-)
G134143 NA non-coding downstream 343976 9154436 ~ 9191292 (-)
G134069 NA non-coding downstream 732282 8802407 ~ 8802986 (-)
G133997 NA non-coding downstream 1051611 8430988 ~ 8483657 (-)
G133915 NA non-coding downstream 1346575 8188289 ~ 8188693 (-)
G134298 NA non-coding upstream 117464 9656356 ~ 9656645 (-)
G134396 NA non-coding upstream 253418 9792310 ~ 9799446 (-)
G134402 NA non-coding upstream 314009 9852901 ~ 10347725 (-)
G134405 NA non-coding upstream 397208 9936100 ~ 9946489 (-)
G134404 NA non-coding upstream 661910 10200802 ~ 10201225 (-)
G134119 NA other downstream 389973 9140824 ~ 9145295 (-)
G134036 NA other downstream 833627 8699411 ~ 8701641 (-)
G134005 NA other downstream 970004 8489200 ~ 8565264 (-)
AMCG00011995 NA other downstream 1475392 8047229 ~ 8059876 (-)
AMCG00011974 NA other downstream 1859037 7651556 ~ 7676231 (-)
AMCG00012058 NA other upstream 73587 9612479 ~ 9626126 (-)
G134395 NA other upstream 251949 9790841 ~ 9791348 (-)
G134397 NA other upstream 270906 9809798 ~ 10244924 (-)
G134400 NA other upstream 308649 9847541 ~ 9848106 (-)
G134411 NA other upstream 416959 9955851 ~ 9956360 (-)

Expression


Co-expression Network