G135779


Basic Information

Item Value
gene id G135779
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15879134 ~ 15900621 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU170590
ggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatacagtgagggaaaaaag
>TU170591
ggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatacacacacacacacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170590 True 329 lncRNA 0.42 2 15879134 15879504
TU170591 False 328 lncRNA 0.42 2 15879134 15900621

Neighbor

gene id symbol gene type direction distance location
AMCG00012310 NA coding upstream 63420 15764029 ~ 15815714 (+)
AMCG00012307 NA coding upstream 348755 15523512 ~ 15530379 (+)
AMCG00012306 NA coding upstream 448247 15430288 ~ 15430887 (+)
AMCG00012303 NA coding upstream 478696 15399433 ~ 15400438 (+)
AMCG00012305 NA coding upstream 481753 15396352 ~ 15397381 (+)
AMCG00012316 NA coding downstream 41011 15941632 ~ 15984389 (+)
AMCG00012317 NA coding downstream 86438 15987059 ~ 16057103 (+)
AMCG00012321 NA coding downstream 157232 16057853 ~ 16100861 (+)
AMCG00012320 LOC108256206,LOC107686994,LOC108411041,LOC107690275,LOC107729189 coding downstream 242029 16142650 ~ 16155119 (+)
AMCG00012319 NA coding downstream 263647 16164268 ~ 16169716 (+)
G135768 NA non-coding upstream 67013 15811913 ~ 15812121 (+)
G135666 NA non-coding upstream 72481 15802429 ~ 15806653 (+)
G135721 NA non-coding upstream 521409 15351885 ~ 15357725 (+)
G135657 NA non-coding upstream 1060409 14811738 ~ 14818725 (+)
G135656 NA non-coding upstream 1074181 14804480 ~ 14804953 (+)
G136025 NA non-coding downstream 202273 16102894 ~ 16103304 (+)
G136040 NA non-coding downstream 271118 16171739 ~ 16172095 (+)
G136051 NA non-coding downstream 293354 16193975 ~ 16196114 (+)
G136177 NA non-coding downstream 637441 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 665278 16565899 ~ 16566231 (+)
AMCG00012309 NA other upstream 70613 15166544 ~ 15808521 (+)
AMCG00012308 NA other upstream 189796 15684478 ~ 15689338 (+)
G135670 NA other upstream 255253 15119725 ~ 15623881 (+)
G135744 NA other upstream 315298 15559904 ~ 15563836 (+)
AMCG00012302 NA other upstream 399585 15452069 ~ 15479549 (+)
G135781 NA other downstream 10627 15911248 ~ 15930848 (+)
AMCG00012324 NA other downstream 204284 16104905 ~ 16142641 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other downstream 275775 16176396 ~ 16183090 (+)
G136076 NA other downstream 349627 16250248 ~ 16259332 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 493078 16393699 ~ 16432813 (+)

Expression


Co-expression Network