AMCG00013449


Basic Information

Item Value
gene id AMCG00013449
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 31053813 ~ 31068895 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013449
GCGCCGTCTCCCGGTTGTTCCGCCGCTCCGCTCAACAGCTGTAACTGACAGAGCAGGACATTTATTAGAGCGATTAGAGTGCCTCCGAgcctttaaattaatattgtatttttaagtctatacattttttaaatgtttatacttgtctttattttatggCGGGAAAACCACGTATAGATCCTTTGTCTCTGTAGTACTACTGAAGTTTAAGACACGTATTGttgcgtgtgtttgttttattaattcatacaGGACAGTTGATATTTTTCGCTAGACGTGAATTTTACATTTGAGTCCTATCAAGATTGGGGCAGATTTGGCAGTACGGTTTCCAAAGCCATGGAGGCCGGATCCAGTGTGCAGGCGGAGCTGGAGTTCCGGGGCGCAGAGTTTTCAGTGCGAGTGGATACAGGGGAGGAACTTATGATTGTGGAGGTGTCCGATTTGCTGACCGCTGACCAATGGAGAGGAGAGTTCGACCCTGCTTATGTTGAGGATCTCACCCGCAAAACTGGTAACTTCAAGCAGTTTCCCATCTTCTGTAGCATGCTGGAATCAGCAGTCTGCAAGAGCAGTGAGTCAGTGTCCCTTGACCTTTTGACCTACAGTGATCTTGAATTGCTACGGAACAGGAAGGCAGGGATGCTGGGCCGTCTACGCCCTCCTGCCCAGTCTTCCACCCTCAGCACCAAACGCTACCTCATCCTCATTTACTCTGTGGAGTTCGACAGGATCCACTACCCTCTGCCTCTACACTACCAGGGCAAGCCAGACCCTGCAGCTCTGCAAAGGGAGATCAGGGCACTGCAGGCAGAGCTGGCAGCACTGGGCATCAACGTTGGCAAGGACCCCCGTGACGCAGAGACACACCGCATCCAAGCAGAGCTGGCCCAGGTGCGGGAAGAGAAGGAGGTTCTGGCCAGGGCCCTGGAGCGGCTACAGACAGGCGGGACAGAGCAGCACAGTGACCCGCGGGGGGGTGACTCCAGTGGGGCCCCGGCGGTCAGGCTCGGCGCTCCTGGccagaggagagggagagggccgCCGATCTGTGTCCCGGGACAGGAGTCTGGGGTTACGGTCAGGGTCCCGGGAGCGCTGCACAAGGGCTGGGGAGCGATCAGCATCCCGGGAGAGGTCAGAGGACAGGGGAAGGAGGTCAGGATCCTCTGGCAGACGCCCACTCATCCCCAGGCACTCCCCTTCACCCTCAGtCAAAGGAAGGCCCAGCGTGGCCTTTTAGCCACACCCACTGGTTCTGAAAGAGGACGGTCCCGCTCTCGGGAGAAGCACCTTCTCAATGGCCGTTTGGGCTCTGCAGGGCGGGGGCGGGGCTCATCTGCGGAGGGTGTGCGAAGCAGGCAGTCTTCAGGCAGCTCATTGGTTGACCTGGAGGAACTAGCTAAGCCCCTCTCTTCTAGtgctggAACCCGGAGCAGAAAGACTGCGCACCCTCCTTTACACTCAGTGCCCTGGAATAGCCCAGGAATGCCCCGAACTCGAACCAAACCTAAGAAGCAGATGTCCAGTACCCCAACTAAGAGTCGTCGAGCTGCTGACAAAGaGAATGACCCCAGCGCTGATTTGTCAGAGATTGACGCCCGACTGCAGGCTCTTCAGGACTACATGAGGAACCTAGACACTGGCCACTAGAGAGCCTAACCTCATATCCCAAAGAGCACCACACGCACTCCCTGAGAAAATGCATAATTCTTGCTGCTCCTGTTCCACTTGCACTGAATCAACCAACCCTGAGGAAAATCCATGGATGAAACCACGCTTCCTGTCTCAACCTGTGGATTGTATGACCCTGCACTGTCCCAGCTTAAACCAATGGTCATTTTATACATCAGTCTATAACCAGCTGTAACAAGTCTGCTGTTGAATTACACAGACCATTACTAAAACATTGTGTGGGTGTATGCGAAGGTTATAGATATTCAATTGATAGCACAGTATACTGAATACAAATTGGGGTGATTCAGCAAGACAAAATAGATGTGTATTGCTTCTGGGATACTGCATGCTGTTTTCAGCATTGCTCCAGCCTGGGACTAAACTCAGGACTGTGCCAAGCTGGGGCTAGATTGAAAAGGGTATGCAGAATTTTAGCAGTACCCCTAGAAGAAAATCaagtgaaataaatgacaatgaatAGGTGACTATGAACTCTGGGAGGGGGTTTCCCCCCTTAAAGAGTAAATGCTGGGAACTTTTCTCCCAGCCCCTCTATTGAAGCAAATGCTAATGGCAGTAATTTAACCTGTGTGACCTGATCTTGCCTTTAGTCACAGATTCTGGGATCTtgaaccctggtcctggagagcttcCAAGCCAGGTTTTTGTCAGGGACCttaacatttatgaaaataaatacatatatagacatCTTATTAAACAGGGATTCTGGTTATAATAACCTGAATACCTTTCTGTCCTCTAGGACCTGTACCGATCATCAAATGtgctcaatttatttatttcccagtcTTATGAAATGTGTGATTTAGCAATTCCATATGATTCCACTGGATTGAGGCTGTCCTTGAGCAGGGTTGGAGACTACTGGATCATGTGGTTCAGAGTAGGGATAGGAAGGCAGCCAGTGTCAGGAGGCAGGAGGTGAGTTGGTCCCTGTACCCAGCAGTACACCAGCTCCTGCCCAAAAGGATGTCCAGTTGTCATGGTTGTGCGCTGTGTGTGATCTGAAACTGAGAGGAATTGCCGATTCTAGATCACAAACTAATGATAACACTGATCCAGGCTGTGACCTGAAACCTCTAGAGCAGgcgttcccaaccctggtcctggaggagccccaaccctgctggtttttgttccaaccgagctatcaattacttaaatgaacccttaattgaagcaacaatctgcttagatttgactttttaaattgtgaaataagaattggttctttaataagttctttatacaattctataagtaacttaaaacccctactgtttaaaataattaaaaggc

Function

GO: NA

KEGG:

id description
K16755 CCDC61; coiled-coil domain-containing protein 61

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013449 True 3000 mRNA 0.50 11 31053813 31068895

Neighbor

gene id symbol gene type direction distance location
AMCG00013445 NA coding downstream 77032 30958189 ~ 30976781 (-)
AMCG00013442 NA coding downstream 115642 30914722 ~ 30938171 (-)
AMCG00013443 NA coding downstream 141001 30910944 ~ 30912812 (-)
AMCG00013441 NA coding downstream 148550 30896736 ~ 30905263 (-)
AMCG00013444 tbcd coding downstream 165623 30871902 ~ 30888190 (-)
AMCG00013448 NA coding upstream 12757 31081652 ~ 31082490 (-)
AMCG00013450 NA coding upstream 27102 31095997 ~ 31096392 (-)
AMCG00013456 NA coding upstream 133418 31202313 ~ 31203338 (-)
AMCG00013453 prkd2 coding upstream 166258 31235153 ~ 31262580 (-)
AMCG00013457 NA coding upstream 225563 31294458 ~ 31297411 (-)
G44420 NA non-coding downstream 6694 31046725 ~ 31047119 (-)
G44384 NA non-coding downstream 115956 30937625 ~ 30937857 (-)
G44382 NA non-coding downstream 118613 30931760 ~ 30935200 (-)
G44381 NA non-coding downstream 122546 30925486 ~ 30931267 (-)
G44330 NA non-coding downstream 279703 30772542 ~ 30774110 (-)
G44469 NA non-coding upstream 234634 31303529 ~ 31310495 (-)
G44487 NA non-coding upstream 300286 31369181 ~ 31371002 (-)
G44507 NA non-coding upstream 385156 31454051 ~ 31492508 (-)
G44519 NA non-coding upstream 437273 31506168 ~ 31506718 (-)
G44528 NA non-coding upstream 576696 31645591 ~ 31646024 (-)
AMCG00013425 NA other downstream 311170 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 567482 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 571487 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 589722 30455727 ~ 30464091 (-)
G44243 NA other downstream 630788 30399887 ~ 30423025 (-)
G44719 NA other upstream 1496865 32565760 ~ 32567952 (-)
AMCG00013488 NA other upstream 1553258 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 2399954 33468849 ~ 33501747 (-)
G45037 NA other upstream 2609329 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 2623949 33692844 ~ 33699712 (-)

Expression


Co-expression Network