AMCG00013658


Basic Information

Item Value
gene id AMCG00013658
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38495950 ~ 38502831 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013658
CTGAGGACTTGATGGCGTCACCATTCTGTGTGCATCTATGACATAGTACGCGTGGCAACGGTTGATTACCCTAACGACGGCGTGCTGTGTTGCAGCGGTTGCCGGGTGGACGGGCGGCTGTTGCAAGAGTTCAGTTTGGATACAAGTACCTACCGATAGTCCATCGATAAGCAACAACAATACCAAGCAATACATCCATAATCGAAACAATTCAAGCGGGATTCGTCCTATTTGTGTCGGTGTCGGAGCCGGGTCCCCCGAGTCCTTGTGGCGGCTCGTCTGCGCTGGAGATGGGCGACCCGGAGGACGTGCTGAGCCCGCGGGAGTCGGCGGTTCGCAGCGCCAAGACGTTCCTGCTTCAGAGCAGCCCCAGCAGCGGCCTCAACCTctatGACCACCTGTCCGCAGTGCTGTCCCGTGTCCTGAGTGAGCGGCCAGAGAGCGCAGTGGACATGCTGGAGACCCTGAGTGCTGATGTGAAGAGGAGCAGCCTACAGCACCGCCAGGGCACCCTGCGCGACCAGCCCGAGACCCCCCCCGGCTTGCCGCTGGCTCAGGAGCAGAGGGGGCTCTTCCTCCGGAGGGGGGGCGATGACGCCGAGCACGAGGATGAGCTGGTGGAGACCCCTCTGCCCAACGTTGCAGAGCTGGCATTCTTCCTGCAGCAGGCCGGGGTGGGTCTGGGCACAGAGGAGACACAACGGGTGTTCCTGGCACTGAAGCAGCTGGTGGACACACAGCCCCTGCAGCGCTGCCGGCTCTGGGGCAAGGTGCTGGGCACACATGGCAGCTACCTGGTGGCCGAGGTGGAATACCgcgagggagaggaggaggaggcagaggaggaggaggatgagggcggcaacagagaagaggaggagagggagggcagCGAGGCCAGGGTGGACCAGGAGGATGGAGAGGGACAAGAGGAGATGGACCCTCTGCCCAAGTCCTCCTACAGGCCCCCCCCGGTGGTGCCCAGGGAGCAGAACGGCTCCGGCACCAACAAGTTCTGCTACTTTGTGTGCAGCGAGCCGGGCCGGTCCTGGGTCCGCTTGCCACCCGTCACCCCAGCTCAGATCACCATCGCCCGTCAAGTGCGTCACCTGCTCACTGGCCGGCTAGACGCGCCTGTGGTCACCTACCCACCCTTCCCCGGCAATGAGGCCAACTTCCTGCGCGCCCAGATCGCCCGTATCTCTGCCGGCACGCAGGTCAGCCCACTGGGGTTCTACCAGTTTGGGGAGGAGGAAggcgaggaagaggaggagggcgCAGCGCGGGATGGTTATGAGGAGAACCCCGACTTCGAGGGCATTCCCGTGCCTGAGCTGGCTGAGACCCTGTCCAGCTGGGGCCGCTGTGTGTGGGTGAACCTGGCCCAGAAGCCGGAGGAGGAtgtggaggaagagggggaggaggaagagaaggaggaggagcccGACGAGCCCGAGCCTGAGGTGGGACCCCCTCTTCTCACCCCCCTGTCCGAGGATGCAGAGGTGAATGGCACCCCTCCCTGGAGCACGTGTGTGTCGTCCTCGCTGATCCCGCAGTTCGCGATCGCCGTGCTGCGCTCTAACCTGTGGCCCGGGGCCTACGCCTTTGCCACCGGCAAgaaGTTTGAGAACTTCTACATCGGCTGGGGTCAGAAGTTTGAGGGGGAGAGCTACACCCCCCCGgtgcccccgcccccccaacgAGAGTACCCCAGTGGCCCCGAGATTACGGAGGCACTCGACCCCACTGTGGAGGAGGAGCAGGCCCTACAGGCCGCACTGGAGGAGCAGAGAGCAGCGCAGGAGGAGACCGAGGagctggagggagaggaggaggaggaggaggaagatgactGAGAGGGGCAGAGGAGGAGTAGTAGGAttgagggggagaggaga

Function

GO: NA

KEGG:

id description
K19756 RSPH4_6; radial spoke head protein 4/6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013658 True 1901 mRNA 0.64 7 38495950 38502831

Neighbor

gene id symbol gene type direction distance location
AMCG00013652 bckdha coding downstream 19787 38472336 ~ 38476163 (-)
AMCG00013651 NA coding downstream 61788 38417544 ~ 38434162 (-)
AMCG00013653 ehd2,LOC107670629,LOC107565090 coding downstream 80302 38407933 ~ 38415648 (-)
AMCG00013642 NA coding downstream 114158 38378800 ~ 38381792 (-)
AMCG00013643 hnrl1,LOC106603088 coding downstream 121461 38360157 ~ 38374489 (-)
AMCG00013657 NA coding upstream 12205 38515036 ~ 38521022 (-)
AMCG00013660 sympk,LOC104962469,LOC107595511,LOC107712124 coding upstream 21924 38524755 ~ 38536222 (-)
AMCG00013659 NA coding upstream 66621 38569452 ~ 38574128 (-)
AMCG00013662 NA coding upstream 77679 38580510 ~ 38585732 (-)
AMCG00013667 NA coding upstream 89456 38592287 ~ 38597883 (-)
G45971 NA non-coding downstream 37151 38457256 ~ 38458799 (-)
G45933 NA non-coding downstream 96952 38397935 ~ 38398998 (-)
G45930 NA non-coding downstream 138555 38355674 ~ 38357395 (-)
G45912 NA non-coding downstream 268763 38226185 ~ 38227187 (-)
G45813 NA non-coding downstream 397402 38097989 ~ 38098548 (-)
G46011 NA non-coding upstream 38445 38541276 ~ 38543342 (-)
G46114 NA non-coding upstream 264595 38767426 ~ 38768235 (-)
G46134 NA non-coding upstream 323673 38826504 ~ 38830732 (-)
G46144 NA non-coding upstream 441982 38944813 ~ 38945061 (-)
G46175 NA non-coding upstream 671724 39174555 ~ 39177975 (-)
AMCG00013661 tmem91,LOC107676753,LOC107757682,LOC107662142,LOC107758240 other downstream 11681 38478552 ~ 38484269 (-)
AMCG00013650 NA other downstream 44603 38445846 ~ 38451347 (-)
AMCG00013641 NA other downstream 80747 38353850 ~ 38415203 (-)
G45917 NA other downstream 246359 38244821 ~ 38249591 (-)
G45906 NA other downstream 264659 38193034 ~ 38231291 (-)
AMCG00013663 b9d2 other upstream 41019 38543850 ~ 38546035 (-)
AMCG00013669 NA other upstream 86148 38588979 ~ 38591202 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other upstream 194564 38697395 ~ 38701074 (-)
AMCG00013685 NA other upstream 279193 38782024 ~ 38783433 (-)
AMCG00013691 NA other upstream 439944 38942775 ~ 38971579 (-)

Expression


Co-expression Network