AMCG00013686


Basic Information

Item Value
gene id AMCG00013686
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38796395 ~ 38802200 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013686
CGCGTGTTTGTTGAATCCTATCGCTGTATTGACGACTTGGCAGAGATGTTGCCCAATAAACTCTACCAGCAGCTGGTCCATCCCTCAAAGTCCCTGCTTGGATGGGTGGTGACCAGGTTTTTCCTGTGGCACCACAGATTGGCGCAGGAGAATGCAGTGAAGCTGCTCCAGATTCAGCCTGATGACACCGTTCTGGAGGTGGGGTTTGGGCCAGGGCTGGGGCTCCGGGCAGCTGCCCCTCTCCTCACCGGCCCCAAGGGCAAGCTGATTGGAGTGGACTACTCTGAGTATATGGTCAGCAAGGCCAGCCAGGCGGTGAAGAAGCACATTGCTTCTGGGAAGGTCACGCTCATCAGAGGCGATGTGGTGGCGATGCCCCTGCCTGATAACAGCATTGACAAGGTCTACCACTGCAACACCTCTTGTCATTGGCCTGACCTGAAAGCTGCGACCTCAGAATTGCACCGAGTGATGAAACCAGGAGCTCTCATGGTGACCACGTTCAAACTTCGCTCACTCAAGTGCGCCGTATACCTGAACTCTGTAAAAGGTGATAACTGGAAGCCTGAGGTCTACATGGAGACCCTCTCTGCCACCGGGTTCAATGATGTTTGGATGCAAGAGCTAAAGGAGGGGCGCACATATTTCCAAGCTATTTTTGCCACTGCTTCTAAATAAAGGTTAACCAGTTGCTTTTTCCTGCAACATTTAAGGCACTTGGTTTAAGGTTTAGGAAAATGCAAGATAAGTGAGACTCAATGTGATTGTGTCcattattgctgtttttgaaGTACTTTCACTTTTGGATTTGGTTTGTTTGCCAAGAAATGTCAgcactacaataaaaaaattggATCCCT

Function

GO: NA

KEGG:

id description
K08242 E2.1.1.143; 24-methylenesterol C-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013686 True 860 mRNA 0.50 3 38796395 38802200

Neighbor

gene id symbol gene type direction distance location
AMCG00013684 NA coding downstream 25686 38769708 ~ 38770709 (-)
AMCG00013676 NA coding downstream 33792 38757885 ~ 38762603 (-)
AMCG00013675 LOC106612618,LOC106580837,LOC105026880,LOC102789735,LOC100701743 coding downstream 51428 38741855 ~ 38744967 (-)
AMCG00013668 NA coding downstream 150203 38641042 ~ 38646192 (-)
AMCG00013666 NA coding downstream 156472 38630194 ~ 38639923 (-)
AMCG00013687 NA coding upstream 43588 38845788 ~ 38851954 (-)
AMCG00013689 NA coding upstream 81891 38884091 ~ 38885788 (-)
AMCG00013690 kcna2b,kcna2,LOC108438074,LOC107673029,LOC104918376 coding upstream 139053 38941253 ~ 38942746 (-)
AMCG00013688 LOC107746331,LOC107673019,LOC100330283,LOC101158021,LOC104931868,LOC103360392 coding upstream 169913 38972113 ~ 38973696 (-)
AMCG00013697 LOC106582726,LOC106566040 coding upstream 381788 39183988 ~ 39192405 (-)
G46114 NA non-coding downstream 28160 38767426 ~ 38768235 (-)
G46003 NA non-coding downstream 245248 38502342 ~ 38551147 (-)
G46011 NA non-coding downstream 253053 38541276 ~ 38543342 (-)
G45971 NA non-coding downstream 337596 38457256 ~ 38458799 (-)
G45933 NA non-coding downstream 397397 38397935 ~ 38398998 (-)
G46134 NA non-coding upstream 24304 38826504 ~ 38830732 (-)
G46144 NA non-coding upstream 142613 38944813 ~ 38945061 (-)
G46175 NA non-coding upstream 372355 39174555 ~ 39177975 (-)
G46236 NA non-coding upstream 616291 39418491 ~ 39418739 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding upstream 726747 39528947 ~ 39530228 (-)
AMCG00013685 NA other downstream 12962 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 95321 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 205193 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 250360 38543850 ~ 38546035 (-)
AMCG00013661 tmem91,LOC107676753,LOC107757682,LOC107662142,LOC107758240 other downstream 312126 38478552 ~ 38484269 (-)
AMCG00013691 NA other upstream 140575 38942775 ~ 38971579 (-)
G46333 NA other upstream 1471191 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 1583861 40386061 ~ 40428625 (-)
G46418 NA other upstream 1784616 40586816 ~ 40587392 (-)
G46423 NA other upstream 1801401 40603601 ~ 40608528 (-)

Expression


Co-expression Network