AMCG00013687


Basic Information

Item Value
gene id AMCG00013687
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38845788 ~ 38851954 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013687
TCCGTAGTAAGACCTGGGTGTTTCTGAGTCACAGCTGAGGTCTGTTGAAAGCAGACACCCTGACAGCCATGCGCCGACCCAGCGCCCTGTCGTCACACGGTACTTCCGGGTTCGAGTGCACTAGTCGGGCTTCCACAATGGAGCCGGCAGTGGAGCGGAGAGCACAGAGGAGCCAGCCAGGGGACCCCCAGCTGATCTTCCTGGGGCAAAACGATGTCCAGAGGGTGCTAGAAGTGTATGTGAAACGCACCTTGAGCCTCAACGATGGTCAGATGGACAGCAGGCAGGCGGAGAGGAGATCCCGCAGGTGGGGCACCATGGTGGAAAGCCATAGCAAGCTGGCCGTTCGAAGGGCGTCTAGCGACTCCTCGGTGCACTTGGAGCCTGAAAAGAACTGGGAGGTGGTCTCGGAACAGGATCTCTTCGCCAGCCCTGCAGTTGCCCAGGACGGCTCCATGGAGCGGGGGAAGAAGGACACCAAGACCTCCAAGAAGATGAAGAAGGCATCCTTTTTTAAGAGCTTCATGAACTTGTTTACGAAGAAGGAAGGCGAAGACAAGGAGGACACGGAGCTCCACCTGGAGGAGACCAGATGCTCCGAACCGCCTCCCACCCCAGAGAGTCCCCCCGCTGCGGTGACGTGTCTGCCCATTCCCCGGCAGGGTCCTGCACATCCCCCTGCTCTCCGTGCAGCCAAATCCCTCAAGAAGAAGAACTCCTTCAAGAGATTTTCTTTCAAGAGGGAGGATGAAGGAAAGGCCAGAGTGCTGAAGAAGCCCTCCTCCCTTGCTCTCAATGTCACTGTGCACAAGCCAGAGGTCGCTCCGAACAACGAACCCCGGGTACAGCAGTACTATGAAaagctgtcggaagagatgcagCGGATTGTGAAAGAGGTGAAAGACAGCCCAGATGAGGTGATGGAAAGTGTGACTAGCAGCATTGAGGCGGACTGCACAACTAAGGAAGAAGAAATCATTCAACAGATCGTCAGTTGTCTTCAAAAGAGCGGGGATGACATCAATGGAAAGCTGAAGGAGAGCGCCAGCCTGAGATCTTTCTTCCAGAGTCTGACCTACTCCTCGTTCCGGGAGCTGGCGGATCGCTACGTGGAGACCGAACTCCATGTCGAGAAAACCCCACAGGCACCCCCCCTGGAGCTGGTCAAGTTCGCCGTCACTCTGGACTTCACGGCCAAAGTGGCGGGGATCTGCAACCACACCGTCGGCCGCATCATGGGCTTCGGAAACCAGTACCTACAGGACCGCTTCACCCAGTACAAGAACGGGAGGGCACTGGACTCAAATTTCAACACAACAGACACCATGCAGAGTCCTGACTGAGGGCCGCTAAACTGGACTGGAATGGAACTGAGAATCATTGTGTGGAACTGGGAGCCAGCAGACGTCAGGGGCTGAGTCAGGCAATACTGAGACAACCTCAGGATTACACACAGTGGCAGGAGCTAAAGAACCGTCTGATCCCGAGAAACCTGTGAACAGAACGGACCGGCAGTGGAGACTTTGAGACGGATTCCTGTCATTCCTGGGAACGAGGGGCAGGTATGGGCGAAAATTAGACTGTCGGCACAGGGATTGTGTGCAGCCACTCCTGTTTAATTTTATAGTCAAATACAGTGTTGCCAGCCCCACCACACGGTAACATTAGGTCTGTTACTGAGCTTTCATCCATACAATATTGCTAGCTGTGGACATTACTTCAGTACTGTTAAGAGGTGGCAATTGTTTACATTGatcttaaatgttattttcatttatttttgatttttgtatttaaaaaaatataagttttattttactattactGTAAATGCTGTCCCTGCTGTTACTGTGAGGCCAGCAATTGTGCTAATTCTCCACTAGTTGGCGTTCTTAAATAACAAGTGttcatggatttaaaaaattataaaacgtGGGACATcaatttatagttttgttttttaaataagcttttGGTACGCTATGCCATTTTACTCGCCTTTTACATTGCATGATTCAACTTTGTTTTGAAAACCATTTTACAGTCGCTGCTAATGAGTTACAGGTCGCGCTATAAAACATGCTGGGTTGTAAAATGCAGAACATGCAAGTTAATGGAACGACAGCGTTTATAGGATGTTTTTAGGAAAAAGAACATGAtgactgatttatatttttcttttttgtaattcgAAAGACAGGATTTCTGAAGCAATTCAGTTTTATGCTAAACCACCTGAGAGTTTGTTATATCAGTCATGAGAGATGAGGATTTTAAAATGGGTAAATGTGAAGGAATGCCACTTTTTTCTATTTCTcagatgtttattaaaataagcagCATCTTTTACACAGGGacacatttaaatgacaaatatgtGAATTCTGATTTGCTTGAAAACCTGTgcaatttgtaaaaaaacagttttctctGGATTGCTTTCCTTTCTGGTCATAATGTGACTTAGGGCTACTGAATGCATTGTTGAAAATTTGCGTTTTTGATATAAATATGTGTTCTTCCTATTTGATTATATACCAATATGGTGATCTTCCATATTGTGAGGTCATAATattggaaaatgtgaaatctgCTTGTGTGAATGAATGCTAGTATTGTCCAGTATACGGACTGATCACAAGGAAATGGCAGAACGCTGACTTGAAGACGTACTGTAAGATCACAGGATCTCTCACAGCCATCACTTGTGGAAATGTGATTGGGCACACTTTGAACTTCTAGTCTTCTCAGAAACAGCCTCTTTGAAGCAAAATGGGACACCTACCAGATCCATGtgtcttatttttgtgtttaccAGCTGTTTCTATTGGGTTTAGATGAAAATGGATGTGCAGtaccattttatttgtacaataaCATAAACCTACACACATTGTACTACTGTTGTTCCAattgcaaagaaataaaacactgtcagtgtattatgctttaaaataaatgttttattttcttctgctgtgaaaatgaaaaatgaactcATTCCAATACATCAGTGCCTTTCTACCATCAACACTTTATAGCACCAGCCGCACATATCCCCAGTTTTCCTCCTGCCAGTCCCAGAatttactgtataataaagGAAAACTGTACATAAATACGTTgtcttcataaatatatttagaatgaCTATTATATTCTACATGCAGAAAAATgttgacagtttatttttttaaatgtacactcacctaaaggattattaggaacacctgttcaatttctcat

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013687 True 3246 mRNA 0.45 6 38845788 38851954

Neighbor

gene id symbol gene type direction distance location
AMCG00013686 NA coding downstream 43588 38796395 ~ 38802200 (-)
AMCG00013684 NA coding downstream 75079 38769708 ~ 38770709 (-)
AMCG00013676 NA coding downstream 83185 38757885 ~ 38762603 (-)
AMCG00013675 LOC106612618,LOC106580837,LOC105026880,LOC102789735,LOC100701743 coding downstream 100821 38741855 ~ 38744967 (-)
AMCG00013668 NA coding downstream 199596 38641042 ~ 38646192 (-)
AMCG00013689 NA coding upstream 32137 38884091 ~ 38885788 (-)
AMCG00013690 kcna2b,kcna2,LOC108438074,LOC107673029,LOC104918376 coding upstream 89299 38941253 ~ 38942746 (-)
AMCG00013688 LOC107746331,LOC107673019,LOC100330283,LOC101158021,LOC104931868,LOC103360392 coding upstream 120159 38972113 ~ 38973696 (-)
AMCG00013697 LOC106582726,LOC106566040 coding upstream 332034 39183988 ~ 39192405 (-)
AMCG00013696 NA coding upstream 346861 39198815 ~ 39202268 (-)
G46134 NA non-coding downstream 15056 38826504 ~ 38830732 (-)
G46114 NA non-coding downstream 77553 38767426 ~ 38768235 (-)
G46003 NA non-coding downstream 294641 38502342 ~ 38551147 (-)
G46011 NA non-coding downstream 302446 38541276 ~ 38543342 (-)
G45971 NA non-coding downstream 386989 38457256 ~ 38458799 (-)
G46144 NA non-coding upstream 92859 38944813 ~ 38945061 (-)
G46175 NA non-coding upstream 322601 39174555 ~ 39177975 (-)
G46236 NA non-coding upstream 566537 39418491 ~ 39418739 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding upstream 676993 39528947 ~ 39530228 (-)
G46240 NA non-coding upstream 693617 39545571 ~ 39553245 (-)
AMCG00013685 NA other downstream 62355 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 144714 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 254586 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 299753 38543850 ~ 38546035 (-)
AMCG00013661 tmem91,LOC107676753,LOC107757682,LOC107662142,LOC107758240 other downstream 361519 38478552 ~ 38484269 (-)
AMCG00013691 NA other upstream 90821 38942775 ~ 38971579 (-)
G46333 NA other upstream 1421437 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 1534107 40386061 ~ 40428625 (-)
G46418 NA other upstream 1734862 40586816 ~ 40587392 (-)
G46423 NA other upstream 1751647 40603601 ~ 40608528 (-)

Expression


Co-expression Network