AMCG00013713


Basic Information

Item Value
gene id AMCG00013713
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39703860 ~ 39713357 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013713
ACCAGTTCAACGGGTATTGTGAGGGTGCTGCTTTTTCATGAAGGGCAActatcttttaattatatccGACATTGCTTTGTAATCATTCCTAGGAAAACTTTTGGGTAGTTGACCAGTTGCAGCAATGTTTGTTGTCTTTCTACAATAACGACATACGAGCTTCCTGAAAACATGCGGCGATGGGGACGTGTAGACGTGTATTACAATGAATTAGATGTGCAGATGAGCTGATCTTTGCGTTTTAAGATAGGGTTAGTGTTAAAAAAATTGCTCGGCATTTTCTGAATTGCGTGATTAGTATGAAAATCAAGTTAGTTAGTTACATGACCATACATGTCAGGAGCGACGCAGCTGTTCGTGATCCGAGCATATGACCAGCAGATATGGGAGAAATCCTTAGAACATACAGAGGTTAAGGGTATCAGAAGCAAACCAAAGAAGAGAGGTCACATCAAATCCGATCTCATTGATGTTGACCTGCTAAGAGGCTCCACGTTCAGCAAGGCCAAGCCGGAGAGTCCCTGGACAGCCCTGACCCGGAAGGGCCTGGTGAGGGTGATCTTCTTTCCGTTCTTCTTCCAGTGGTGGATCCAGGTCACTTCCAGATGCATCTGCACCTGGTTGCTAGTGCTTTATGTCTTGCAAGtggtGGCAGTGCTTCTGTATTTAAAAGTGCCAGCGGTCAGTGTCACTGAACTGTTCGGCCCCATGTGTCTCATGCTGCTCCTGGGGACAGTCCACTGTCAGATAGTGTCCACCGCATCCAGCCGCAGCCCTGGGGTCAGCACCacaaggaggaggaggCAGAGGAAGGGGAGGACCGTTGACAGTGACGCAGTGGATATAGATGAAGGCCTGGACTGTACGTCAGAGGGTTGTCCCAGGGGAGATCAGAGGCAGGATGGCTCAAAGAGGTCAGGCGCTGAAGTGTCAGACTACGCCTCCAGCGAGGAGGACACAGGGCAGCGCAGATGCAGTGTGGAGGAACTCACCTTGGACAACATCCTGAGGAACAGGAAACCTTTCTCGACACAAAATGGCGCCCTGACTCGGGAGGAGATTGTGTGTCCGCAGCGTGCCGGCAGCTCTCGTCGGAGGTCTTCAGACAGCCCACGGCTCGGCTCCGACACAGATGATATGCTGTgcgaggagctgctgcaggggcCCGACAGCCCCTCCACGTGCAGCAGCGACAGCGAGGAGGCGGGCCCACCCTGCCACAACCTACCCCCTACTATGCCCAAGACACTAGAGGAAGACTTCTTCCAGCAGAGCCACTTGTCCTGGCTGCAGAGCTGCCACCCCTCGGCAGACCGCGTGTCGGCCATCGTGTGGGAGGGCGGGGAGTGCAAGAAGACCGAAATGTCAGTGTTGGAGATCAGTGCTGTCATCATGAGCCGGGTGAAGGATGAGGAGCAGGGCCTGGGCTACCTGATGCTGGGTGGAGGGGTGACTGTGGTGCTGGCTCTGCTGCCCCTGGCGTTCCGGCTCGCACGGAGGCTGGACACGGTGCGGCTGGGCTCCCTCTCGGCCCCCGAGCTCCTGGGCCTGGCCTGGGGGCCGACTAACCTGTGTGCACAAAGCCTTGTCCTCATCACCCTGCTGGAACGTTTCTGCCTCACCTGGCTCTTCTTCTTCATGATGTGCGTGGCGGAGAGGACATATAAGCAGCGGCTCCTCTTTGCCAAGCTCTTCAGTCACTTGACATCTGCCCGGAAGGCCAAGAAGTCTGAGATCCCACACTTCAGGCTGAAGAAGGTGCAGAACATCAAGATATGGCTGTCCCTGCGCTCCTTCCTCAAGAGACGAGGGCCCCAGCGCTCGGTTGACGTCATCGTCTCTTCTGTCTTCCTGCTGGCTCTGTCTGTGGCCTTCATCTGCTGTGCCCAGCTCCTGCACAGTCATCACACCTTCCTGGACTCAattaACTTGTATCTGAAGATGGAAAAGAAACCCAACAAGAAAGAAGAGCTGAACATCGTGAACAATGTTTTGAAACTGGCTGTAAAACTAATGAAAGAGCTAGACACCCCCTTCCGGTTGTACGGACTAACTGTGAACCCTCTCATCTACAACATCACCCGTGTGGTCATCCTGTCTGCGGTTTCTGGAGTAGTCAGTGACCTACTGGGCTTTAACATCCGATTATGGAAGATAAAGTCTTAATGTGACCACACCAACCGTGCTTTTTGGCTGCCTGGTAGATACACTACAGGATCGCTTGCCTTCAGGGTGACCCAGCCTTGCAGATGTCACTGTGACACGGTGGCCAAGAAATGGCACTTTTTTCAGCCTTCCAGTGAACCATGAGGAATCGGCATCCAGGAAGAAATCACTAATAACTGCCACACCGGGATACATGGGCTCGATCCACAAACTCTACCTTGAAACGAATGCCTACATGTACACACCTCTAAGATTGTATATAATAAGCATCAATCCATGGCACCTGCTGTGTAAGAGCCAAATTAAACCCCCGTTTATCTCCAGGGGTTCCTGATCAGCTTGTGCACATTTTAAAGCCAGTTTAGCAATCACTAAAGCCTTAATGTGGTAAAAGTGGGACATGAGATCTACTAGAACTGATACACATAAAACAGCATTGTAATGTCATTTAATGTCTGGTCTGGTCTGCCTTGAACACTGTGCATCTTTGAAACTAATGCACAGCATGCGTGAGCTTTTGATGAACTTCATATGGGCTTTGATTAACTTTGATGGACTTGTTTCAGACTCACGTATGGCCTCTCTCTAGAAGTATTTACACAGCAAAATCACACGGACCTTGAGCTGATGACAGAAAGTGAGCAAACGGTGTGAGATACAGCAATGATCTGAGCTTTCTGACAAGTCTCCCTGCAGTCCATTGACCCTGGCTGGACCAAGAGCGTGAATTACTACATCATAAGGAAATGAATCATCGAGGTTCCATttatcagaaaaacacaaaaaaactgacATATCTGTGATGGTAATTTAGTACTGTTGTTTACTGTGACAAGGATCCAAAAATTACAGTGAACTCTTCATATTTAccacttttgaaaacaaaagtctGCCAGTTTGTTGTGTAAGATGCACAAATACCCACATCCGCTGCCTGATTAAGCAAAGGATGACACATACCTAGGAGAAATGCTTTAACATTACAAGTGTTGACAAAAAGACTTGAGTggttaaacattacattttgtgaggaagcttttattaaaataaaaaacaaatctgttccGTTTTCATGTAATTTTGTACAAGGATTAGGATTCGACTCAGATCACTGCGAGTCCAGAGCACAGACAGCAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013713 True 3305 mRNA 0.49 16 39703860 39713357

Neighbor

gene id symbol gene type direction distance location
AMCG00013714 NA coding downstream 854 39687697 ~ 39703006 (-)
AMCG00013709 yod1,LOC106565882 coding downstream 106250 39594057 ~ 39597610 (-)
AMCG00013710 NA coding downstream 127816 39573024 ~ 39576044 (-)
AMCG00013703 myog coding downstream 292612 39408255 ~ 39411248 (-)
AMCG00013701 LOC107553398 coding downstream 427211 39270881 ~ 39276649 (-)
AMCG00013717 NA coding upstream 34734 39748091 ~ 39749050 (-)
AMCG00013715 NA coding upstream 47982 39761339 ~ 39834756 (-)
AMCG00013718 NA coding upstream 123989 39837346 ~ 39838308 (-)
AMCG00013716 NA coding upstream 142001 39855358 ~ 39856320 (-)
AMCG00013722 NA coding upstream 163070 39876427 ~ 39896462 (-)
G46263 NA non-coding downstream 76670 39622363 ~ 39627190 (-)
G46245 NA non-coding downstream 141564 39562097 ~ 39562296 (-)
G46240 NA non-coding downstream 150615 39545571 ~ 39553245 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding downstream 173632 39528947 ~ 39530228 (-)
G46236 NA non-coding downstream 285121 39418491 ~ 39418739 (-)
G46368 NA non-coding upstream 668193 40381550 ~ 40381998 (-)
G46370 NA non-coding upstream 671992 40385349 ~ 40385758 (-)
G46372 NA non-coding upstream 703318 40416675 ~ 40418642 (-)
G46395 NA non-coding upstream 728953 40442310 ~ 40446394 (-)
G46419 NA non-coding upstream 879791 40593148 ~ 40593420 (-)
AMCG00013691 NA other downstream 732281 38942775 ~ 38971579 (-)
AMCG00013685 NA other downstream 920427 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 1002786 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 1112658 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 1157825 38543850 ~ 38546035 (-)
G46333 NA other upstream 560034 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 672704 40386061 ~ 40428625 (-)
G46418 NA other upstream 873459 40586816 ~ 40587392 (-)
G46423 NA other upstream 890244 40603601 ~ 40608528 (-)
AMCG00013732 NA other upstream 904986 40618343 ~ 40637228 (-)

Expression


Co-expression Network