AMCG00013714


Basic Information

Item Value
gene id AMCG00013714
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39687697 ~ 39703006 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013714
ACATACTCAACACAGTTGTGTGTTCTTGTTCATTTTAAGGGCAATGCAGTCCTCCTCCAGGAGTGCCCCTCATGGTCTTGACAGACATAAAGCCTATGGATGTTTTTCCTGAAGGTGCAtctgtgaaatacaaatgtgcTCATGGATACCAGAACCGTGGCGGCTCCCCCAAGAGCACCTGCATCAACAAGGGCTGGACCACACCAACACTGCTCTGCAAACTGGTTACGTGTCCCCCACCTCCACAAATTGAACACGGTGAAGTCGTCAACGTTATCCCTACACGTGTGCAGTACAGAGATGTAATTGAGTACAGGTGTAACAAATTCCACTTGATTGGGgaaagtgaaatattttgtaCGAACTATGGGAACTACAGCGGCCCTCCTCCCCAGTGCAAAGATGAAAATGACTCCCTTATCACAGCTATTACCTGCCCTGATCCTTCCCTGCCAAATGGACGAATCTGGAGGGGACGGAAAAATCCTTACGAATACAGGGATGTTGTGACATTCTCCTGCAATCCTGGCTATGAGATGGAAGGATCTGGAAGCATCACATGTGAGGAGCATGGCTGGTCTCCAGCAATTCTTCATTGTCATCGTTTTGAGCCACCAACCACCGAGCCACCGACAGATCCAGCAGAAGAATgtaaTTTGTGGTGCCAATTTAAGAAGTGGTTGCGTAATCTTTGAGTGACACCTACCTCAGTTCAAGTCTTCAGTGGAATAATGCTACTGTGTACAGGTCTGTCATAATCAGGGTTTCCCGCAGCTATATTCAGGCCAGACGGCCCACCAAAAATCAGTGCTGCctgtcagaaaaacaaaaataaaaaaaataaaataaaactattaaaacacaaatgcccTAGTAATTGCTTTGTAATTTTCTGCGGGAAACAGTGATAATACATACAAGCATCAGTTACATGAAACAGcaattttttattgtaattgttatatgTGTAATGGGGTGCTTTTTAAAGTCCATTTAGTAGCAATTCACTTTatgttgacaaattaaaaaaaaaaaaaacaacaatgaactaaccattttcaaatgatcataatattattcataattgaATGCAAAAGAAAGTGTGACAGATTTTCCACATCACTTCACCACTGAAAAGTATACTGTAAGGATTAATAAACCACACCTGGTTACATTTATAGCTGAATCTGTATAGAGTTCAGAGGAGAGCTCTCTCAATGCAGTCACATGGCTTAGCATCCAGTAAGAAAATAATGCGGAGTCCTGTGTGCCAGGTGTTGAGGACTGATCAGCTCAGTATCTTGAGTAAGATCTATATCCTGTTACCAAAAGCACAAAAAGgggttcaaaaataaaaaggcttttACACAGACAGTATATAAATTGCTAAATAATGCATGTAAGTGTAATTGCTCCCAACCATCTCTCTCATCTACAGCTTTGAGTTTTGTATTAACATGGGAGATCCGAGTACAACTGAGCTCAGATCTCTTTGCTTTCACTATTAAACCTTAATCCATGTTCACAACCAAGTGGTATGGTCTCCAGTCACATGTTGCTGCTTGAAGTCAGACTAGTATGCAATAGCATATACATTAGGATAAAGGCAATTAACTTtggtatgaaaaaaaaaggacagacAGTGCCAAGTGAATGAATACTGAACATCTAGTTCACATAGAACTCTCTCTATCATAGATCACATGATTAACAAGTGCAATAGCTTGGCAGAGAATCTCTAACTGCAAGAGCACACAGCGCATGAAAACACACGACACCACAAAAGGACATTGTGTTTGTAGAGTGTTAGTATAGAAAGAGTACATAAAAGAGACCTCTCACCTCAATGGGAAAAAAGGAATAACTCACATTTAAAGTTGGTATTCACACTTACTTTTTGTGCATGTTGGAAGAGAAGGGTGCCATTGCCCATTGTCCCCACAGGTAACCCTGCCACTGCCTTGAAGCCTGTATCCAGCGTCACAGTAAAAGTGCACAATGCATCCGTGTGTATTTAGATTTTTGGAACGAGATTTTATTCCACCATTAGGCAACACAGGAGGAGGGCAAACAACTCCTGtaaaattaacagaaattaCTGCTGTGAAACATGACCAACTCGCAAGGCCACAACGACAGCAGGGTTTTTATACACATGTCCCTTTCAGGTATTGCAGTGAAGTCTAGTATATAGTGCACTATACTATAAGTTATGTCAAGTATCGTCAAAATGATATGCCACAATGCAATGTATCCTTTAAATTGTTGTGTGCCATTTTGGTTggacaaaacaacacaaaaaagactgtcaaagaagaaaataatttatttagtctCAATGGAAAATCAAAAGAAGTCAGATCTGTACTGATTCAGGTTTAATTCAAAATCCTGAGCAAGAAGGACAAAGTCAACCCCAACGGCTCAGCATCAAAGCGAGGCCTAGAGGCTACCAGTGAAAATTAAGATTAGGTGCAGTCAGCGtacagactgtactgtactttaaaagTGAGAAATGACTTTGAAAGGTTACCAGTTATACTAGCGGTATAGCACTCAAAATGGAAACCCTGTGCAGTACTTACTGTCACATTTTGGCATGCAAGGACTCCATTTGCCGTACTGATTGCACGTCACAGAACCAGATCCATTGAGGCGAAAGCCCTTCTCACAAGCAAAGGACACAGAGTCTCTGTATGTATAAGATACATGTCCGCTTGTCTTTCTCGCATTCCTCACAATGGGATTCATACAATTAATCTCTGCAAGAAGAACAGTACGTATGTTATAGATGTTGCATCTCATATCTTGTCACAATGCTGCAATATTATTGATGTAGGAAAAATATCATCAGGCATTAATTCTGCAGTGGCAGTAGATTATACATCTAATTAGgaaattcaaaacattatttaaattaacactaaTATTCTTTgataagtcttttttttttggccaccACTCAAAAGAAGTAATACAACCTGatttataatgaataaacacCACTGGTTTAACTATATCAATTTAtaatacaactaaaataaaagtcaaTTTGTATGATTGAGTAAAACTGACATCACAGCATGTTATATAAATATCCctccttgttcttttttctgCTACCTCTGCCGTTCAGAATGAGTTTGGTGTAATATATTCACAAGATACAAAAAC

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process
GO:0004806 triglyceride lipase activity molecular_function
GO:0016298 lipase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013714 True 3174 mRNA 0.39 6 39687697 39703006

Neighbor

gene id symbol gene type direction distance location
AMCG00013709 yod1,LOC106565882 coding downstream 90087 39594057 ~ 39597610 (-)
AMCG00013710 NA coding downstream 111653 39573024 ~ 39576044 (-)
AMCG00013703 myog coding downstream 276449 39408255 ~ 39411248 (-)
AMCG00013701 LOC107553398 coding downstream 411048 39270881 ~ 39276649 (-)
AMCG00013700 NA coding downstream 419038 39266509 ~ 39268659 (-)
AMCG00013713 NA coding upstream 854 39703860 ~ 39713357 (-)
AMCG00013717 NA coding upstream 45085 39748091 ~ 39749050 (-)
AMCG00013715 NA coding upstream 58333 39761339 ~ 39834756 (-)
AMCG00013718 NA coding upstream 134340 39837346 ~ 39838308 (-)
AMCG00013716 NA coding upstream 152352 39855358 ~ 39856320 (-)
G46263 NA non-coding downstream 60507 39622363 ~ 39627190 (-)
G46245 NA non-coding downstream 125401 39562097 ~ 39562296 (-)
G46240 NA non-coding downstream 134452 39545571 ~ 39553245 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding downstream 157469 39528947 ~ 39530228 (-)
G46236 NA non-coding downstream 268958 39418491 ~ 39418739 (-)
G46368 NA non-coding upstream 678544 40381550 ~ 40381998 (-)
G46370 NA non-coding upstream 682343 40385349 ~ 40385758 (-)
G46372 NA non-coding upstream 713669 40416675 ~ 40418642 (-)
G46395 NA non-coding upstream 739304 40442310 ~ 40446394 (-)
G46419 NA non-coding upstream 890142 40593148 ~ 40593420 (-)
AMCG00013691 NA other downstream 716118 38942775 ~ 38971579 (-)
AMCG00013685 NA other downstream 904264 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 986623 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 1096495 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 1141662 38543850 ~ 38546035 (-)
G46333 NA other upstream 570385 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 683055 40386061 ~ 40428625 (-)
G46418 NA other upstream 883810 40586816 ~ 40587392 (-)
G46423 NA other upstream 900595 40603601 ~ 40608528 (-)
AMCG00013732 NA other upstream 915337 40618343 ~ 40637228 (-)

Expression


Co-expression Network