AMCG00013715


Basic Information

Item Value
gene id AMCG00013715
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39761339 ~ 39834756 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013715
ATGGCCGATAAGATGGAAGTGCGTCTTGTGGTGAAGGCAGCTGGCTTCATCTGTCTGGACGTGGTGGGCATCCCAGGGAACCTGACCGTGCTCCTGTTCTTCTGCTACCTGCGTCTGTCCGATGGCCGGCTTCTCCCCAACGACCTCATCCTGAGCAAGCTGGCGTTTGTCAACCTGGTGGTGGTCCTGTGCCGTGGAATCCCACAGGCCTTAACTGCACTTGGCATCCAGAACCTCTTTGGGGAATATGGCTGCAAAGTGGTCATCTATATCTACCGTGTCAGCCGTGCCATGTCCATCTGTATCACCTCCCTCCTCAGCTGCTACCAATGCATAGTCATCGCCCCTGGATCAACATGGTGGATGGTGCTGAAGCAGAGGGTCCCCAGAAGCATCCCCCTGATCATCTTGCTGCTCTACGGGCTGAATTGTATGTTGTGCCCTGCTGGATTTATCTACACTTCAACAGTTCCCAACTCCACCATCCCAGAGTACACCCTGAACTTGGAGTTTTGTATTGTGGCATTCCCTGGCTTCAAGGTATTCATGGCCAATGGAGTCGTGCACATAATTcgtgattttgtgtttgtgggcATCATGGCTGGTGCAGCCATTTATATTGTCCAGATTCTGTACTACCACAGGAAGCAGATGAGGGGCATGCATGGCTCGGATCGGAACCAGAGAAAAACGGCAGAGGCGTCCAATTCAGTGCTCATGCTTGTGGCCATGTATGTCATCCTGTTTGGCCTGGACAATGTAATGTTGGTTTACACCCTCTGTGTCACCCGTGTCCACCCTGCAGTCAATGACACACGTGTCTTTTTTGCCTCCTGCTACTCTGCCCTCAGCCCAGTTTTCATCATCGCCACCAACAAAAAGTTTGCAGCCAGACTGAACTGCTTTTCCCATGGCCAGGAAGAAAACATTGGGACTACACATCAGATTAAGACCCTGAGATTCACGGGTCAGGAATTTCAAATTGGAGACACTGAGAGGAATAAGTGTCTGAGGCTACCTGTTTCAAAGCCCTGCGGGGGCGATGACTATGCATTGGTAGCAGCTGAGGAGGGAGGTGATACAGATGGACATGGCACGGCCTATTCGGACCACCACCAGGTTGACAAACGCCAGCTTGCTCAGGATGACGTCATTGGGGAGAAGCCGGCCATCAGACAGACGCAGGTAGCAGAAGAACAGGAGTACGGTCAGGTTCCCTGGGATGCCCACCACATCCAGACAGATGAAGCCAGCTGCCTTCAGCACAAGACGCACTTCCATCTTCTAGAGAAACTGACCTGCAATAGTCCAGCAAAATTGTGGAAGAAAGTTGGAGACCTTTGGATATCAACTCAAGCACAAGCCAAGATGGAAGTGCATCTTGTGCTGAAGGCAGCTGGCTTCATCTATCTGGACATGGTGGGCATCCCAGGGAACCTGACCGTACTCCTGTTCTTCTGCTACCTGCGTCTGTCTGATGGCCGGCTTCTCCCCAATGACCTCATCCTGAGCAAGCTGGCGTTTGTCTACCTGGTGGTGGTCCTGTGCCGTGGAATCCCACAGGCCTTAACTGCACTTGGCATCCAGAACCTCTTTGGGGAATATGGCTGCAAAGTGGTCATCTTCACATACCGAATAGGCCGTGCCATGTCCATCTGTATCACCTCCCTCCTCAGCTGCTACCAATGCATAGTCATCGCCCCTGGATCAACCCGGTGGACGGTGCTGAAGCAGAGCGTCCCCAGAAACATCCCCCTGATCATCTTGCTGCTCTACGGGCTGAATTTTATGgcattcatgGCCAATGGAGTCATGTCAATAATTcgtgattttgtgtttgtaggTATCATGGCTGGTGCAGCAATTTATAATGTCCAGATTCTGTACTACCACAGGAAGCAGATGAGGGGCATGCATGGCTCGGATCGGAACCAGAGAAAAACGGCAGAGGCGTCCAAGTCATTGCTCATGCTTGTGGCCATGTATGTCATCCTGTTTGGCCTGGACAATGTAATGTGGGTTTACACCCTCTGTGTCACCCGTGTCCACCCTGCAGTCAATGACACACGTGTCTTTTTCGCCTCCTGCTACTCTGCCCTCAGCCCAGTTTTCATCATCGCCACCAACCAAAAGTTTGCAGCCAGACTGAACTGCTATTCCCATGGCCAGGAAGAAAACATTGGGACTACAGACAGGACAAAGAGCAATGACAAGGATACAGTACCGAGGGAGGGCAACTGTGGCAATACACAGTTGGTGAATGACCGAGAGGCTGAATTACCGATAGTCTTGTGCAAACTTGTCACAGCGAAGCTTCCGGTTCACCTTCCTGTTGGACACGATCACAACTACCGGGCAGACAGTGGCATAGAGAGTGGAGAAGAAAACACGCACGTCATTCATGACCACTGGCACTTTCCCAATGATTCCCTTCGCTCTCTGATGATGCTGGTAGAGAATGAGCAGGATATAGAGGCTGGAGAGCACCATGAGAAGGATGAAGCATGTGTCCCGGGCAAGGTACATGACTCCGATGGCAAAAAGCCAGAAGAGGAGGCTGAGGGGCAGCAGGCAGCGCGAGAGCCAAGGCTTCAGGCTGTACAgacgggaggaggagggggcgaTGGTGACACCCTGGTAGGCGCTCAGCAGGAAGGTAAGGCAGATGGACATGGCACGGGTTGTGCGGTAGGTGAAGATGAGGAATTTGCATGTGGCCGTGTTATAGGAGCCTCTGTAGTCCAACGCAGAGAGGCTCTGAGGGATGCCCCGGGTCAGGATCAGTACCAGGTTGACGAAAACCAGCTGGGAGACGATGATGTCGGCAGGCAGGAGCCGGCGCTCAGCCCGGGCGATGTGGACAAATACCAGCAGTACGGCGAGGTTGGCCGGGATACCGATCTGCTGGTAGAGAATGAGCAGGATGTAGAGGCTGGAGAGCACCATGAGAAGGATGAAACACGTGTCCCGGGTGAGGGACATAACTCCAATGGCGAAGTAGGACTCCTCACTAGGAAACTCAACCAGGCAGTAGCCCAGGTTGAGTGTGAGTGCACTGAACGTGATGTTATGGATCTGGCTGGTGTAGAGGATGCTGGAGTAGGAAGTACCCCCATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013715 True 3120 mRNA 0.53 14 39761339 39834756

Neighbor

gene id symbol gene type direction distance location
AMCG00013717 NA coding downstream 12289 39748091 ~ 39749050 (-)
AMCG00013713 NA coding downstream 47982 39703860 ~ 39713357 (-)
AMCG00013714 NA coding downstream 58333 39687697 ~ 39703006 (-)
AMCG00013709 yod1,LOC106565882 coding downstream 163729 39594057 ~ 39597610 (-)
AMCG00013710 NA coding downstream 185295 39573024 ~ 39576044 (-)
AMCG00013718 NA coding upstream 2590 39837346 ~ 39838308 (-)
AMCG00013716 NA coding upstream 20602 39855358 ~ 39856320 (-)
AMCG00013722 NA coding upstream 41671 39876427 ~ 39896462 (-)
AMCG00013723 NA coding upstream 65348 39900104 ~ 39905668 (-)
AMCG00013733 NA coding upstream 806320 40641076 ~ 40647148 (-)
G46263 NA non-coding downstream 134149 39622363 ~ 39627190 (-)
G46245 NA non-coding downstream 199043 39562097 ~ 39562296 (-)
G46240 NA non-coding downstream 208094 39545571 ~ 39553245 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding downstream 231111 39528947 ~ 39530228 (-)
G46236 NA non-coding downstream 342600 39418491 ~ 39418739 (-)
G46368 NA non-coding upstream 546794 40381550 ~ 40381998 (-)
G46370 NA non-coding upstream 550593 40385349 ~ 40385758 (-)
G46372 NA non-coding upstream 581919 40416675 ~ 40418642 (-)
G46395 NA non-coding upstream 607554 40442310 ~ 40446394 (-)
G46419 NA non-coding upstream 758392 40593148 ~ 40593420 (-)
AMCG00013691 NA other downstream 789760 38942775 ~ 38971579 (-)
AMCG00013685 NA other downstream 977906 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 1060265 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 1170137 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 1215304 38543850 ~ 38546035 (-)
G46333 NA other upstream 438635 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 551305 40386061 ~ 40428625 (-)
G46418 NA other upstream 752060 40586816 ~ 40587392 (-)
G46423 NA other upstream 768845 40603601 ~ 40608528 (-)
AMCG00013732 NA other upstream 783587 40618343 ~ 40637228 (-)

Expression


Co-expression Network