AMCG00013737


Basic Information

Item Value
gene id AMCG00013737
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 40884954 ~ 40888451 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013737
ATGCCGTACGCATATCAGTGTTGTGTGTATGGAGCCtgcaacaacaagaacaacaatgtCTACAAACCAGGGAGCCAGTGGGAAGCTGAGCAAACAGAAAATGATGAGGAGGACATACCCAAGAGGACCTTAGCCACCTTTCCCAGCCATGGTGACACTAACTATGACTTGGACATGGAAGAATTCCAGTTGGAAGTTGATTCCAAACTTCAGCCCAGTAGCCAATGTACGCCCACCCCAGgcCCTTTTAAACCGTGCGACTACCTCTTTGACAGTTGGGTGATCCGGTTGGGTGTGTGGACCATTGCTCTCATCTCCCTGTTCGGCAACAGCCTTCTGATCTACACCGTCTTTGCCTCACCCAGCTACCTCTCCCCGGTCAAGTTCGTCATTGGTTCCATTGGGGGCGCCAACCTGCTCACGGGGATGTGTGTGGGGATTCTGGCCCTTGTAGATGCCCTGACCTTCGGGGAGTTCTCCCGGCATGGTGCTCGCTGGGAGACAGGCCCAGGATGCCAAGCAAGTGGCTTCCTGTCCGTCTTTGCCTCCGAGGCTTCCATCCTCTTCCTGACGCTGGCCGCAGTTCAGTGCAGCATCTCAGTGTCTTGCGTCCGGGCCTACGGCAAGTCCCCCTCTTTCAGTAGTGTGAAAGCAGCCGCCGTATGTTGTGTGGGACTCTCCCTGGCAGTGGCAGCACTTCCCCTCTTCAAGGTGGGGGAGTACGGCTCCTCTCCCCTTTGCCtgccctctcctctcccagaaGGCCAGCCATCCACCTTGGGCTTCATGGTGTCTTTGATCATGATGAACACCCTTTGCTTCCTGGTGATCACCGGCACCTACATCAAGCTGTACTGGGACCTGATGAAGGGGGAGTTTGACAGTATATGGGACTGCGCCATGATCAAACATGTGGCTTGGCTGATCTTCACCAACTGCCTGCTCTACTGCCCCGTGGCCTTCCTCactttctcctccctcctcagcCTCTTCCCCATTGGAGAGGAGGTCATCAAATCCGTGCTGCTGGTTCTGCTGCCCCTCCCCTCCAGCCTGAACCCCCTTCTCTACCTCCTGTTCAACCCTCACTTCAAAGAGGACCTGCGTCTTCTCTGGAGGAGAACCAAGCCCTCAGTGAACGATACCCTGGATTCGTACATTTCGGAAGAGACGGAGAAGAGTTCCTACGACTCCACACAGGCTCTGGTCTCCTTCTCCGACATGGAGCTGCTCTTTGAGGGGACAGTCCTGCCCAGGCTGGAGCCTGTTCGTTACCCCACCTCTCCTTCGGTCCCTCTCATCCCCTGCCAGCAGCAAGCAAGGAAAGAGGGCACTACGTTCTCTGGCCCAGGCCCCTGCCTCAAGAAAGAGGAACTTTTAAAAAGTGACAACCTCCTGGTCAACAGTAATAATGGTAACATTGCAAGTGGATCCTACACTTGCTCACCCTTATCatctaatttataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013737 True 1467 mRNA 0.55 3 40884954 40888451

Neighbor

gene id symbol gene type direction distance location
AMCG00013733 NA coding downstream 237806 40641076 ~ 40647148 (-)
AMCG00013723 NA coding downstream 979286 39900104 ~ 39905668 (-)
AMCG00013722 NA coding downstream 988492 39876427 ~ 39896462 (-)
AMCG00013716 NA coding downstream 1028634 39855358 ~ 39856320 (-)
AMCG00013718 NA coding downstream 1046646 39837346 ~ 39838308 (-)
AMCG00013738 NA coding upstream 1278 40889729 ~ 40927189 (-)
AMCG00013742 NA coding upstream 104338 40992789 ~ 40995408 (-)
AMCG00013747 NA coding upstream 314613 41203064 ~ 41222134 (-)
AMCG00013748 NA coding upstream 334440 41222891 ~ 41227102 (-)
AMCG00013749 NA coding upstream 347855 41236306 ~ 41279477 (-)
G46421 NA non-coding downstream 283422 40601198 ~ 40601532 (-)
G46420 NA non-coding downstream 287056 40597358 ~ 40597898 (-)
G46419 NA non-coding downstream 291534 40593148 ~ 40593420 (-)
G46395 NA non-coding downstream 438560 40442310 ~ 40446394 (-)
G46372 NA non-coding downstream 466312 40416675 ~ 40418642 (-)
G46458 NA non-coding upstream 94681 40983132 ~ 40983557 (-)
G46459 NA non-coding upstream 95182 40983633 ~ 40986274 (-)
G46476 NA non-coding upstream 164697 41053148 ~ 41061824 (-)
G46484 NA non-coding upstream 211252 41099703 ~ 41103966 (-)
G46491 NA non-coding upstream 283274 41171725 ~ 41174790 (-)
AMCG00013732 NA other downstream 247726 40618343 ~ 40637228 (-)
G46423 NA other downstream 276426 40603601 ~ 40608528 (-)
G46418 NA other downstream 297562 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 456329 40386061 ~ 40428625 (-)
G46333 NA other downstream 609856 40273391 ~ 40275098 (-)
AMCG00013773 NA other upstream 1540326 42428777 ~ 42455758 (-)
G46742 NA other upstream 1811055 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 2720831 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 4450408 45338859 ~ 45344015 (-)
G47261 NA other upstream 4734787 45623238 ~ 45623895 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000002_01103311_01128430 LGR6 coding CI01000002 null 1103311 ~ 1128805 (+)