AMCG00013813


Basic Information

Item Value
gene id AMCG00013813
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43538890 ~ 43549246 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013813
CTCTCTCAGTACAGAATATTAAAATTACCACAGGAGCTGAACATGCCAGCATCTTTGTGCTTTTTGCTTCTCCTGGTAGTTCTAGGCTGTGTGACGTCGGCTGACAGAAGAGTGACTGGGGCTGAAGGTGGAAGTGTAGAGATTAAGTGTCCATATCAGGATGGTTATCAGTACAGTGTGAAGTACTGGTGTCGTCATCCCTGTGGGAATAAGGATGTTCTCATTAGCACTGGTACGACAGACACTGTTGTTACTGCAGGGAAATTCACCCTCACGAACTCTGTCTCAGCAAAGACCTTTACTGTGTGGATGAACAGACTGACACTGCAGGATTCTGGGGTCTATTACTGCGGAATGGAGGAATGGGGCAGAGACACATTAACAAAGACACACTTGAGCGTCAGTAAAGCTCCCTCAGTCTCCCTATTGTCCACCCCTGGACCTGTGACTGTAGAGACCACAGTTACTGTCACACCAACCACAGAGATCTCCACCCAGGCTGAAGACATGTCTCCTGTAGGAGCCAGCACAGCAGGAGCAGTACATGATGGCAGACGTCCAGGCATCAAAGAAATGTCTATAGTCTTCGGAGCTCTGTCCGGGGTGGGgatcattgtgtgttttgtggcacTTTTCTTTCTGTACATGAAATGGCGTACAGGTGTACAAGGAGAACAGTGTAGGAGAACAGCCCCAGTACAGGTTGAAGAGGCCGACAGTTCACTGAAGAACCACAAGAGGGGACCAGCAGGACACACACATGGACCCCAGACAACAACATTGTATTGTACCCCAAGAAGAGCCGGCTATTGACACgaatattgtatttctgttctgATCTTCACTGAAGAAGTCATTCCCAGTGTGGCTGCACTGCAGTGAACTCCAACACGTTTTAACAAGGACAAGGAATCTTAATCAAGGTTAAAATCAGTTAATAAACACAATCTCCAGTTTTTGACATTATCCACATGCCCACACATGGGTACATCATACATcgtataaataattaaaactgtagaACCGCATGTCTGTccctgagtgtctgtgtgaacaaggcCACTGTCTCACGGTCTACAGTACTGTTACACAGTTCAACCTTGAAATGAACAGGAAAGCTCAGAGAAGCTTCAGAATGAACACCCG

Function

GO: NA

KEGG:

id description
K06719 CD300; CD300 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013813 True 1146 mRNA 0.47 7 43538890 43549246

Neighbor

gene id symbol gene type direction distance location
AMCG00013814 sike1 coding downstream 74826 43458376 ~ 43464064 (-)
AMCG00013809 csde1,LOC107731193,LOC106566849,LOC107549382 coding downstream 83845 43432634 ~ 43455045 (-)
AMCG00013808 nras,LOC107682628 coding downstream 115708 43409249 ~ 43423182 (-)
AMCG00013810 ampd1 coding downstream 129938 43390772 ~ 43408952 (-)
AMCG00013805 NA coding downstream 165472 43354997 ~ 43373418 (-)
AMCG00013819 NA coding upstream 20320 43569566 ~ 43593466 (-)
AMCG00013823 NA coding upstream 145661 43694907 ~ 43700141 (-)
AMCG00013822 slc16a1b,slc16a1a,LOC107591766,LOC107711946,LOC107669643,LOC107717534,LOC107679710 coding upstream 154752 43703998 ~ 43710995 (-)
AMCG00013825 LOC106517667,LOC108231490,LOC103356074,LOC106582736,LOC107098533,LOC105928018 coding upstream 455631 44004877 ~ 44006633 (-)
AMCG00013828 NA coding upstream 611406 44160652 ~ 44177626 (-)
G46982 NA non-coding downstream 16008 43522328 ~ 43522882 (-)
G46855 NA non-coding downstream 468717 43069972 ~ 43070173 (-)
G46849 NA non-coding downstream 469154 43035563 ~ 43069736 (-)
G46817 NA non-coding downstream 537187 43001481 ~ 43001703 (-)
G46815 NA non-coding downstream 539966 42998725 ~ 42998924 (-)
G46990 NA non-coding upstream 17549 43566795 ~ 43566995 (-)
G47041 NA non-coding upstream 370415 43919661 ~ 43919962 (-)
G47055 NA non-coding upstream 566994 44116240 ~ 44123206 (-)
G47082 LOC100696538,LOC103362809,LOC102199655,LOC108254710,LOC103467398,LOC102777028,LOC108265463 non-coding upstream 576520 44125766 ~ 44148931 (-)
G47096 NA non-coding upstream 673140 44222386 ~ 44223384 (-)
G46742 NA other downstream 837822 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 1083132 42428777 ~ 42455758 (-)
AMCG00013732 NA other downstream 2901662 40618343 ~ 40637228 (-)
G46423 NA other downstream 2930362 40603601 ~ 40608528 (-)
G46418 NA other downstream 2951498 40586816 ~ 40587392 (-)
AMCG00013820 tmem167b other upstream 60036 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 1789613 45338859 ~ 45344015 (-)
G47261 NA other upstream 2073992 45623238 ~ 45623895 (-)
AMCG00013882 cry4,LOC108413014 other upstream 2370390 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 2412944 45962190 ~ 45974311 (-)

Expression


Co-expression Network