AMCG00013845 (LOC103370234,LOC108436315,LOC103028137,LOC108246862,LOC104939458,LOC106513331,LOC108254806)


Basic Information

Item Value
gene id AMCG00013845
gene name LOC103370234,LOC108436315,LOC103028137,LOC108246862,LOC104939458,LOC106513331,LOC108254806
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45316447 ~ 45329179 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013845
GCTCTTCGTATGATGTGAAATCGGGGCTGAAGGTGGCGGTGAAGAAGCTGTCCCGGCCGTTCCAGTCCATCATCCACGCCAAGAGGACGTACAGGGAGCTGCGGCTCCTCAAGCACATGAAGCATGAAAACGTGATTGGGCTGCTGGATGTGTTCACCCCTGCCACCAGCCTGGAGGAGTTCAACGATGTGTATCTGGTGACTCACCTGATGGGCGCCGACCTCAACAACATTGTGAAGTGCCAGAAGCTCACGGACGACCACGTGCAGTTCCTCATCTACCAGATCCTGCGAGGCTTGAAGACGTTTCACTTGTCCTCCTCTTTTTCCCCGCAGGATCTGAAACCCAGCAACCTGGCGGTCAATGAGGATTGTGAGCTCAAGATCCTGGACTTTGGGCTGGCGCGCCACACGGACGATGAGATGACTGGCTATGTGGCGACACGGTGGTACAGGGCCCCAGAGATCATGCTCAACTGGATGCACTACAACATGACAGtggaTATTTGGTCCGTGGGGTGCATCATGGCAGAGCTGCTGACCGGACGGACGCTGTTTCCTGGCACAGATCATATTGATCAGTTGAAGCTAATTATGCTGCTCGTCGGAACACCAGAGCCCGAGCTCTTGATGAAAATATCTTCAGAGTCTGCCAGGAATTATATCAACTCCCTGCCGCACATGCCCAAGAGGGACTTCGCCGACGTGTTCATCGGAGCAAACCCCTTGGgACTAACCTATGAAGAAGTGGTCAGCTTCGAGCCGCCGGTCTTCGACGGGGACGAGATGGAGTCGTGAGGGCGGAGCGGGACGCCCCCCCCACCGCCACGCTGCGAGGATGTGCTCCGTCACCGGACCTGCGTTTGGAAAATGTCATTCAAGTGCCTGTTGTATCTCAGTGCTGGGTTCTCTGTGGGATAAAAGGGGCaatagcattttttattttctgtacaacTTTTAATGATTGTTTCCTGCTTGCAGTATTGGCTGACGTCTCAGGACTGGGACTGAGGTTTCCCCTGTCATATTcatgggtgg

Function

NR:

description
PREDICTED: mitogen-activated protein kinase 14 isoform X2

GO:

id name namespace
GO:0000165 MAPK cascade biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K04441 P38; p38 MAP kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013845 True 1037 mRNA 0.54 9 45316447 45329179

Neighbor

gene id symbol gene type direction distance location
AMCG00013847 NA coding downstream 746 45315172 ~ 45315701 (-)
AMCG00013844 LOC108265696,LOC107725303,LOC107598961,LOC107734522,LOC107570980 coding downstream 1622 45295506 ~ 45314825 (-)
AMCG00013842 NA coding downstream 27845 45279776 ~ 45288602 (-)
AMCG00013836 NA coding downstream 582702 44730857 ~ 44733745 (-)
AMCG00013835 LOC107556298 coding downstream 638948 44671088 ~ 44677499 (-)
AMCG00013843 NA coding upstream 30008 45359187 ~ 45373711 (-)
AMCG00013856 NA coding upstream 275647 45604826 ~ 45615255 (-)
AMCG00013859 NA coding upstream 286956 45616135 ~ 45621865 (-)
AMCG00013861 NA coding upstream 307749 45636928 ~ 45638791 (-)
AMCG00013857 LOC107698281 coding upstream 310651 45639830 ~ 45647135 (-)
G47185 NA non-coding downstream 48051 45268054 ~ 45268396 (-)
G47180 NA non-coding downstream 211560 45104223 ~ 45104887 (-)
G47168 NA non-coding downstream 349519 44966010 ~ 44966928 (-)
G47162 NA non-coding downstream 352967 44961849 ~ 44963480 (-)
G47153 NA non-coding downstream 506571 44809645 ~ 44809876 (-)
G47259 NA non-coding upstream 293336 45622515 ~ 45622755 (-)
G47358 NA non-coding upstream 496544 45825723 ~ 45826654 (-)
G47359 NA non-coding upstream 498786 45827965 ~ 45828251 (-)
G47365 NA non-coding upstream 516670 45845849 ~ 45854800 (-)
G47391 NA non-coding upstream 591927 45921106 ~ 45922914 (-)
AMCG00013820 tmem167b other downstream 1701868 43609282 ~ 43614579 (-)
G46742 NA other downstream 2615379 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 2860689 42428777 ~ 42455758 (-)
AMCG00013732 NA other downstream 4679219 40618343 ~ 40637228 (-)
G46423 NA other downstream 4707919 40603601 ~ 40608528 (-)
AMCG00013846 NA other upstream 9680 45338859 ~ 45344015 (-)
G47261 NA other upstream 294059 45623238 ~ 45623895 (-)
AMCG00013882 cry4,LOC108413014 other upstream 590457 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 633011 45962190 ~ 45974311 (-)
AMCG00013890 cacna1s other upstream 746250 46075429 ~ 46083542 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000052_02327973_02342338 MAPK14, MAPK14A, P38B, P38A, MAPK14B coding CI01000052 null 2327973 ~ 2342338 (-)