AMCG00013858


Basic Information

Item Value
gene id AMCG00013858
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45664880 ~ 45668281 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013858
ATGGGGAACTCAAACGGTGTGTCCATGGAGGAGCTGACCTCCTGCGAGATCCACCAGTGGTACAAGAAGTTCATGACGGAGTGCCCGTCCGGCCAGCTCACTCTCTACGAGTTCAAGCAGTTCTTCGGGCTCAAGAACCTGTCCGACTCCTCCAACGCCTACGTGGAGCAAATGTTTGAGACTTTCGATATGAATAACGATGGATCCATCGACTTCATGGAGTACGTGGCAGCCCTGAGTCTGGTTCTGAAGGGGAAAGTGGAACAGAAGCTCAGATGGTACTTCAAGCTGTATGATGTTGATGGCAACGGCTGCATCGACAGGGGGGAGCTGCTGAACATTATCAGGGCAGTCCGGGCCATCAATGGCTGTAAGCATGAGATGTCAGCGGAGGAATTCACCAACATGGTGTTTGACAAGATAGACATCAACGGTGATGGCGAGCTGTCTCTGGAGGAGTTCATGGAGGGCGTCCAGAAGGACGAGATGTTGCTGGAGGTGCTGACTCAGAGCCTGGACCTCTCCCACATCGTGCAGATGATCGAGGGTGAGAGGAGCCCGGAGGAGCAGGGCCCACAGTCCTGA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013858 True 585 mRNA 0.54 4 45664880 45668281

Neighbor

gene id symbol gene type direction distance location
AMCG00013857 LOC107698281 coding downstream 17745 45639830 ~ 45647135 (-)
AMCG00013861 NA coding downstream 26089 45636928 ~ 45638791 (-)
AMCG00013859 NA coding downstream 43015 45616135 ~ 45621865 (-)
AMCG00013856 NA coding downstream 49625 45604826 ~ 45615255 (-)
AMCG00013843 NA coding downstream 291169 45359187 ~ 45373711 (-)
AMCG00013860 NA coding upstream 6975 45675256 ~ 45682090 (-)
AMCG00013864 NA coding upstream 27354 45695635 ~ 45702773 (-)
AMCG00013867 NA coding upstream 43810 45712091 ~ 45712579 (-)
AMCG00013866 NA coding upstream 75498 45743779 ~ 45752588 (-)
AMCG00013865 NA coding upstream 115585 45783866 ~ 45784824 (-)
G47259 NA non-coding downstream 42125 45622515 ~ 45622755 (-)
G47185 NA non-coding downstream 396484 45268054 ~ 45268396 (-)
G47180 NA non-coding downstream 559993 45104223 ~ 45104887 (-)
G47168 NA non-coding downstream 697952 44966010 ~ 44966928 (-)
G47162 NA non-coding downstream 701400 44961849 ~ 44963480 (-)
G47358 NA non-coding upstream 157442 45825723 ~ 45826654 (-)
G47359 NA non-coding upstream 159684 45827965 ~ 45828251 (-)
G47365 NA non-coding upstream 177568 45845849 ~ 45854800 (-)
G47391 NA non-coding upstream 252825 45921106 ~ 45922914 (-)
G47538 NA non-coding upstream 563044 46231325 ~ 46238514 (-)
G47261 NA other downstream 40985 45623238 ~ 45623895 (-)
AMCG00013846 NA other downstream 320865 45338859 ~ 45344015 (-)
AMCG00013820 tmem167b other downstream 2050301 43609282 ~ 43614579 (-)
G46742 NA other downstream 2963812 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 3209122 42428777 ~ 42455758 (-)
AMCG00013882 cry4,LOC108413014 other upstream 251355 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 293909 45962190 ~ 45974311 (-)
AMCG00013890 cacna1s other upstream 407148 46075429 ~ 46083542 (-)
G47501 NA other upstream 492258 46160539 ~ 46163487 (-)
AMCG00013903 NA other upstream 630880 46299161 ~ 46311118 (-)

Expression


Co-expression Network