AMCG00013861


Basic Information

Item Value
gene id AMCG00013861
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45636928 ~ 45638791 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013861
ATGTCGGCTGCCCCTCCCGCAGACCTGCTGGTGTCCCTGGCCCAGCAGTGCCTCCAGGCCGggccaaagaagaagaagacgaagCGCCTGCCTCCCTCCGTGTGCCTGGACCTCGCCGCCCAGATCCTGGTGGTGGACAGTGGACTGAAACCCGCCTACCTGTACGACGTCAACTGCGCTGGCCCGGAACAAATCTGCCTCTACCTGGACGGGCTGTACGCGGCGGGGCTTCTAACCGGAGCACTGCACGTGCTGCCCCTGGATGGCAGCGTCCTGGTGCTCAGCGTGGACCGGGCCATCCTGCGCCTGGAGGAGCTGCTACTGAAGGACACGGTCGCCATCGTGGACGTGTCCCGGTCCAGGAGCGCACCAGCGATCGCCGGACCGGAGAGCGGGGTCAGAGAGCTGACGCTGGACACGGTGGCAGATCTGAGAATCTGGCGGAGCGGTGCGGGACGGGACAAGCCCCCGCAGGTCATATCCCTGAGCGAGGCGGTGCGATCCCGGTGGAACCTGTGCACCCTGTTCGGGATTCTCCTCGGCTACCCGGCCACCTACTGGTTCGAGCGGGACGGGGGCTCCGACAGCTGCCTGAGCATGGTGCCGCTGCGGGTGAGGGCGGTGAGCGCATCCTGCCCGGCCATCGCCCCAGGGTTCAGAGCGCAGATCTGCTCCTTCAGTGTACCGGACCTCCTCACACCGGACACTCGGGGTGCGGTGGACTGCTGGACTAGAGACATGCAGGAGAAGTTCAGCCAGCAGTTGGCCTTCACAGACATCAGCCTCTCCACTGAGACGATCGCCTTGCCGTCAAGATCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013861 True 822 mRNA 0.66 2 45636928 45638791

Neighbor

gene id symbol gene type direction distance location
AMCG00013859 NA coding downstream 15063 45616135 ~ 45621865 (-)
AMCG00013856 NA coding downstream 21673 45604826 ~ 45615255 (-)
AMCG00013843 NA coding downstream 263217 45359187 ~ 45373711 (-)
AMCG00013845 LOC103370234,LOC108436315,LOC103028137,LOC108246862,LOC104939458,LOC106513331,LOC108254806 coding downstream 307749 45316447 ~ 45329179 (-)
AMCG00013847 NA coding downstream 321227 45315172 ~ 45315701 (-)
AMCG00013857 LOC107698281 coding upstream 1039 45639830 ~ 45647135 (-)
AMCG00013858 NA coding upstream 26089 45664880 ~ 45668281 (-)
AMCG00013860 NA coding upstream 36465 45675256 ~ 45682090 (-)
AMCG00013864 NA coding upstream 56844 45695635 ~ 45702773 (-)
AMCG00013867 NA coding upstream 73300 45712091 ~ 45712579 (-)
G47259 NA non-coding downstream 14173 45622515 ~ 45622755 (-)
G47185 NA non-coding downstream 368532 45268054 ~ 45268396 (-)
G47180 NA non-coding downstream 532041 45104223 ~ 45104887 (-)
G47168 NA non-coding downstream 670000 44966010 ~ 44966928 (-)
G47162 NA non-coding downstream 673448 44961849 ~ 44963480 (-)
G47358 NA non-coding upstream 186932 45825723 ~ 45826654 (-)
G47359 NA non-coding upstream 189174 45827965 ~ 45828251 (-)
G47365 NA non-coding upstream 207058 45845849 ~ 45854800 (-)
G47391 NA non-coding upstream 282315 45921106 ~ 45922914 (-)
G47538 NA non-coding upstream 592534 46231325 ~ 46238514 (-)
G47261 NA other downstream 13033 45623238 ~ 45623895 (-)
AMCG00013846 NA other downstream 292913 45338859 ~ 45344015 (-)
AMCG00013820 tmem167b other downstream 2022349 43609282 ~ 43614579 (-)
G46742 NA other downstream 2935860 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 3181170 42428777 ~ 42455758 (-)
AMCG00013882 cry4,LOC108413014 other upstream 280845 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 323399 45962190 ~ 45974311 (-)
AMCG00013890 cacna1s other upstream 436638 46075429 ~ 46083542 (-)
G47501 NA other upstream 521748 46160539 ~ 46163487 (-)
AMCG00013903 NA other upstream 660370 46299161 ~ 46311118 (-)

Expression


Co-expression Network