AMCG00013866


Basic Information

Item Value
gene id AMCG00013866
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45743779 ~ 45752588 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013866
ATGGGTCGCAAAGAAGGAAAGGACGGAAACACCTGGAAGAAAAGCACGGACAACATCCAGGATGTCTTTGAGATCATGGAGGTGCTGGGGTCGGGGGCCTTCTCCGAGGTGTTCCTGGTGAAGGAAAGGAAGACTGGCAAGCTCTTTGCTTTGAAGTGCGTCAAGAAGGTGCCAGATCTTCGTGACAACAACCTGGAGAATGAGATTGCAGTGTTGAGGAGGATCAAACATGACAACGTTGTGGCCCTGGAAGACTTTTACGAGAGCAGAACCCATTACTACCTGGTCATGCAGCTGGTGTCTGGAGGGGAGCTGTTTGACCGGATTCTGGACCGTGGGGTTTACACCGAGAAGGACGCCAGTCTGGTAATTCGGCAGGTGCTGGACGCGGTCAGCTACCTGCACAACAACAGCATCGTCCACAGAGACCTGAAGCCAGAGAACCTGCTGTACTACAGCCAGGACGAGAACTCAAAAATCATGATCAGCGACTTCGGCCTCTCCAAGATCGAGGACAACGGTGTCATGGCCACTGCCTGCGGGACTCCAGGATATGTGGCTCCAGAAGTCTTGGCCCAGAAGCCCTACAGTAAGGCGGTGGACTGCTGGTCAATTGGGGTCATAACCTACATCCTGCTGTGTGGATACCCCCCCTTCTATGAGGAGACCGAGTCCAAACTCTTCGCCAAAATCATGAAGGCCGAGTATGAGTTCGACTCTCCGTTCTGGGACGACATTTCTGATTCAGCAAAGGATTTCATTCGTAACATGATGCAGAAGAACCCCAAGACTCGCTACACTACTGAGAAGGCTCTGAGACACCCTTGGATCGTGGGGAAGACGGCGCGCACCCACGACATCTACCACTCGGTGAGCGAGCAGATCCAGAAGAACTTTGCCAAGTCCAAGTGGAGGCAAGCCTTCAACGCCACAGCGGTCATCAACCACATGAAGAAGCTCCAGCTCACCCACTCTGAGGTGATCAACAAGCCGGTCCCTGCGATCACGGTCATGGGCTCATCTATGCCCGGCTCCCCCAAGAGGCACGCTCTGCAGGAGCCCAACGGCAACGTGGAGCACCCCTGCTCCCTGCCCGTGCCCGACAACCTGAACGAAGCCAAGAGCCACTACCACGGCCCGCGCACCACCCACGGCGAATCTCCCCACGGGATCCACTTCCTGTCCGAGCCGGCCAACTTAAACGGCGCCGCCAAGAAAGCGTATGTGTCTCCTACGCTGATCATCCCGGTGAAGAGCATGAGTGACCAAAACCCTCCCCTGCAGACGGGGGTGTGCTCCGTCATGTGA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013866 True 1308 mRNA 0.56 11 45743779 45752588

Neighbor

gene id symbol gene type direction distance location
AMCG00013867 NA coding downstream 31200 45712091 ~ 45712579 (-)
AMCG00013864 NA coding downstream 41006 45695635 ~ 45702773 (-)
AMCG00013860 NA coding downstream 61689 45675256 ~ 45682090 (-)
AMCG00013858 NA coding downstream 75498 45664880 ~ 45668281 (-)
AMCG00013857 LOC107698281 coding downstream 96644 45639830 ~ 45647135 (-)
AMCG00013865 NA coding upstream 31278 45783866 ~ 45784824 (-)
AMCG00013875 NA coding upstream 52843 45805431 ~ 45806333 (-)
AMCG00013874 rbbp5,LOC106583489 coding upstream 54417 45807005 ~ 45816694 (-)
AMCG00013877 NA coding upstream 70529 45823117 ~ 45831441 (-)
AMCG00013876 LOC105900578,LOC105920322 coding upstream 104878 45857466 ~ 45859867 (-)
G47259 NA non-coding downstream 121024 45622515 ~ 45622755 (-)
G47185 NA non-coding downstream 475383 45268054 ~ 45268396 (-)
G47180 NA non-coding downstream 638892 45104223 ~ 45104887 (-)
G47168 NA non-coding downstream 776851 44966010 ~ 44966928 (-)
G47162 NA non-coding downstream 780299 44961849 ~ 44963480 (-)
G47358 NA non-coding upstream 73135 45825723 ~ 45826654 (-)
G47359 NA non-coding upstream 75377 45827965 ~ 45828251 (-)
G47365 NA non-coding upstream 93261 45845849 ~ 45854800 (-)
G47391 NA non-coding upstream 168518 45921106 ~ 45922914 (-)
G47538 NA non-coding upstream 478737 46231325 ~ 46238514 (-)
G47261 NA other downstream 119884 45623238 ~ 45623895 (-)
AMCG00013846 NA other downstream 399764 45338859 ~ 45344015 (-)
AMCG00013820 tmem167b other downstream 2129200 43609282 ~ 43614579 (-)
G46742 NA other downstream 3042711 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 3288021 42428777 ~ 42455758 (-)
AMCG00013882 cry4,LOC108413014 other upstream 167048 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 209602 45962190 ~ 45974311 (-)
AMCG00013890 cacna1s other upstream 322841 46075429 ~ 46083542 (-)
G47501 NA other upstream 407951 46160539 ~ 46163487 (-)
AMCG00013903 NA other upstream 546573 46299161 ~ 46311118 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000186_00144110_00151887 CAMK1GA coding CI01000186 null 143662 ~ 151887 (-)