AMCG00013908


Basic Information

Item Value
gene id AMCG00013908
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 46388154 ~ 46389618 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013908
ATGCCAGCCAACGAACAACACAAACGCCAGATCATCTCGGTTTTCTCTGCGCTTTTCCGATGCCTGGGAAGTGCGGGTTACTCGAGATGTGGCCCGTGTTGGCCGGTCCGGGGGCAGCTGTCTTCTGGGACTCAAGTTGGCTCCTCAAGGATTCCCCCCTCCAGTAGTCAGTCTTGCTGGCAGCTGGGTTGTACTGGGGGGGACAGGCAGCAGTTGCCCAACAGGACGTTGACCAACGTGTCAGTTGGGAAGCTGTCGTCACTGCCAGCAAGTTCCTGCTCGGATTTCCCCAGGCTAGTGCCTCCCCGGCACGGCGACGGCCTGTACGACTCCTACATGAGGACGGACCCGGTTGGAAACGAAGACCCGGACTCCCACGGCCACAGCCCCTCCTCCCTGCCCCCGCTGCCTAAACACACGGTAAGAGTCCCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013908 True 435 mRNA 0.61 3 46388154 46389618

Neighbor

gene id symbol gene type direction distance location
AMCG00013905 dyrk3,zgc:172180,LOC107728622 coding downstream 1913 46384682 ~ 46386241 (-)
AMCG00013898 tmem9,LOC107679355,LOC107711977,LOC106572715 coding downstream 285538 46094540 ~ 46102616 (-)
AMCG00013891 NA coding downstream 300376 46087083 ~ 46087778 (-)
AMCG00013888 NA coding downstream 313726 46050593 ~ 46074428 (-)
AMCG00013889 mtch1,LOC106572175,LOC106566941 coding downstream 349273 46028415 ~ 46038881 (-)
AMCG00013907 NA coding upstream 15206 46404824 ~ 46406931 (-)
AMCG00013906 NA coding upstream 62446 46452064 ~ 46465408 (-)
AMCG00013910 srgap2 coding upstream 80753 46470371 ~ 46507717 (-)
AMCG00013914 NA coding upstream 540957 46930575 ~ 46946388 (-)
AMCG00013916 NA coding upstream 580641 46970259 ~ 46976190 (-)
G47538 NA non-coding downstream 149640 46231325 ~ 46238514 (-)
G47391 NA non-coding downstream 465240 45921106 ~ 45922914 (-)
G47365 NA non-coding downstream 533354 45845849 ~ 45854800 (-)
G47359 NA non-coding downstream 559903 45827965 ~ 45828251 (-)
G47358 NA non-coding downstream 561500 45825723 ~ 45826654 (-)
G47661 NA non-coding upstream 413993 46803611 ~ 46838764 (-)
G47718 NA non-coding upstream 667921 47057539 ~ 47120601 (-)
G47717 NA non-coding upstream 681725 47071343 ~ 47075028 (-)
G47766 NA non-coding upstream 836183 47225801 ~ 47227254 (-)
G47807 NA non-coding upstream 1105793 47495411 ~ 47495684 (-)
AMCG00013903 NA other downstream 77036 46299161 ~ 46311118 (-)
G47501 NA other downstream 224667 46160539 ~ 46163487 (-)
AMCG00013890 cacna1s other downstream 304612 46075429 ~ 46083542 (-)
AMCG00013883 NA other downstream 413843 45962190 ~ 45974311 (-)
AMCG00013882 cry4,LOC108413014 other downstream 459845 45919636 ~ 45928309 (-)
G47666 NA other upstream 482251 46871869 ~ 46875370 (-)
AMCG00013932 ruxe,snrpe other upstream 798977 47188595 ~ 47200897 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other upstream 1475232 47864850 ~ 47868863 (-)
G47896 NA other upstream 1577807 47967425 ~ 47974915 (-)
AMCG00013964 NA other upstream 1976425 48366043 ~ 48375096 (-)

Expression


Co-expression Network