AMCG00013921


Basic Information

Item Value
gene id AMCG00013921
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47015056 ~ 47017727 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013921
ATGATAAGGTACCTGGATTACCTCCATGTGATGACCTACGACTTCCACGGATCTTGGGAGCAGCAGACTGGTGAGAACAGCCCCCTGTACAAGGGACCTGCTGACCAGGGCAGCTACATCTACGCAAATGTGGACTACGCCATGAACTACTGGAAGAGCAATGGGGCCCCTGCAGAGAAGCTGCTGGTTGGTTTCGCCACCTACGGCCACAGCTTCAGGCTGGCTAACCCCTCCAACAACGGCGTGGGAGCTCCCGCTGCTGGCCCTGGACCTGCTGGAACTTACACCAGACAGTCTGGATTCTGGGCTTACTATGAGATCTGCTCCTTCCTCACGCAGGGAGCTACCCAGGCTTGGGATGCCACTCAAATGGTCCCCTATGCCTACAGCGGAAACATCTGGGTGGGATATGACAACGTGAAGAGCTTCCAGAACAAGATTCAGTGGCTGAAGCAGAACAACTTCGGTGGTGCCATGGTGTGGACTCTGGATCTGGATGACTTTAGCGGTACCTTCTGCAACCAGGGCAAATACCCCCTGATCAACACCCTGAGGAGCGGGCTCGGCACCTCCAACTCAGGCAGCGGTGGAAACCCCACCAGTGGCTCCTGCGCCGGCAAGGCCGACGAACTCTACCCCGACACGGCCAACAAGAACCACTTCTGGCACTGCATGAATGGCAAGACCTACAACCCCcttccccccttccccccttcCACCCACCCTgccatccccctctcccttggcCTGAACTCAGGTGTTATTTGTCTCCTGTGTAATCAGAAATCTCACTccagaataaattaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013921 True 807 mRNA 0.56 6 47015056 47017727

Neighbor

gene id symbol gene type direction distance location
AMCG00013920 NA coding downstream 14842 46995142 ~ 47000214 (-)
AMCG00013915 NA coding downstream 29386 46976691 ~ 46985670 (-)
AMCG00013916 NA coding downstream 38866 46970259 ~ 46976190 (-)
AMCG00013914 NA coding downstream 68668 46930575 ~ 46946388 (-)
AMCG00013910 srgap2 coding downstream 507339 46470371 ~ 46507717 (-)
AMCG00013922 NA coding upstream 7124 47024851 ~ 47026381 (-)
AMCG00013926 NA coding upstream 83852 47101579 ~ 47112942 (-)
AMCG00013925 NA coding upstream 133364 47151091 ~ 47162001 (-)
AMCG00013929 NA coding upstream 183528 47201255 ~ 47212425 (-)
AMCG00013928 NA coding upstream 195872 47213599 ~ 47217346 (-)
G47661 NA non-coding downstream 176292 46803611 ~ 46838764 (-)
G47538 NA non-coding downstream 776542 46231325 ~ 46238514 (-)
G47391 NA non-coding downstream 1092142 45921106 ~ 45922914 (-)
G47365 NA non-coding downstream 1160256 45845849 ~ 45854800 (-)
G47359 NA non-coding downstream 1186805 45827965 ~ 45828251 (-)
G47718 NA non-coding upstream 39812 47057539 ~ 47120601 (-)
G47717 NA non-coding upstream 53616 47071343 ~ 47075028 (-)
G47766 NA non-coding upstream 208074 47225801 ~ 47227254 (-)
G47807 NA non-coding upstream 477684 47495411 ~ 47495684 (-)
G47809 lrrn2,LOC108425772 non-coding upstream 522836 47540563 ~ 47545591 (-)
G47666 NA other downstream 139686 46871869 ~ 46875370 (-)
AMCG00013903 NA other downstream 703938 46299161 ~ 46311118 (-)
G47501 NA other downstream 851569 46160539 ~ 46163487 (-)
AMCG00013890 cacna1s other downstream 931514 46075429 ~ 46083542 (-)
AMCG00013883 NA other downstream 1040745 45962190 ~ 45974311 (-)
AMCG00013932 ruxe,snrpe other upstream 170868 47188595 ~ 47200897 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other upstream 847123 47864850 ~ 47868863 (-)
G47896 NA other upstream 949698 47967425 ~ 47974915 (-)
AMCG00013964 NA other upstream 1348316 48366043 ~ 48375096 (-)
AMCG00013967 NA other upstream 1438176 48455903 ~ 48479577 (-)

Expression


Co-expression Network