AMCG00013955


Basic Information

Item Value
gene id AMCG00013955
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48160674 ~ 48165662 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013955
ATGGTAGTTCTGTACCCTGGTTTGGGGCGGAGTGAGTTTGGCCGAGAGAACCGATACACGGCGATGATATGTTTGCTACAGGTAGCTGTCTGGGTGCCTGTGGTGTTTCCTGTTAACCGCACTGCACAGAGCGCAGGGCCGGGGGTCTCGCTCTCGCAGGGGCCTCACAACATCATCAAGAAGGTGAATGGGCAGAAGTTCGTGTACCGTTTCGTCTCGTACCCAGACATCCTGAGCGGGGAGGTGGGCTCGGCCGGCAGGGTGGAGGGGGCTGAGGCGGGGGagggcggcggcggcggcggcaccGGGGGGTCTCTGACCTTCTCCGAGAGAGGGGGCACCTCCAGGGACAAGGAGAACCGGGCTGGGGGGGAGAAAGGCGCTGGCTCGGGCAGACCGTCCAGTCGCAATGACTATATCCACTCGGGCCTGTACACCTCCTTCACGCTGACTTCGCTGCAGTCCGGCACGCGGCTCTTCAAGTCCATCAAGGTGGAGAACCCAGGCGAGAAGCTGGCTGAGAAGAAGGCCGGCCCGGAGCCGCAGCAGCCCCAGTCCGTCATCAAGTTTGGGACCACACCGTCTCGGAACCCGCCGGCGGTCGCCCTGGAGGTCGTCTCGCCGGCCCCGCCCCCCCAGCCTAAATGTGGCGGTGAGCTCAAAGCGGCCACGCCCCCTCCCCTGCTCCCGGCCCCGCTGCCCGTGGAAGAGACCGTGCCGGATGGCCCCTCCTCCGGCCCCGCCCCGTTCACCGACTCTGCCCTCTCGCCCTCCCTTTCCTCCCGCTCGCCCTCCCCCAGCAACGTCCCGGACTCGTCGCAGGAGCTGGTGATCGACAGCGACATCGAGTACATCTCCTCGCAGCCTGCCAGGGGGCCACTGCAGGAGGCAGAGAGGTCCCCTGCGCTGAGCAGCAGCAGTCAGAGCGGCAAGTCCAAGAAGCCCAAAGGCCTGGAGCTGACGCCCACCCTGGTGGTCACCAGCAGCGACTTCAGCCCCATCAACCTGGCCAGCCCCTCCCTGCCCACGGCCTCCCTCACCCCCGCTTTCCTTCAGACGCCCACCCTGCTGCTGACGCCCAGCCCCCTGCTGTCCAACATCCACTTCTGGAGCACGCTCAGCCCGGTGGCGCCCCTCAGCCCGGCACGCCGACAGGGGACACACACGCTGTTCCAGttcccGACGGTCCTCACCCCCCACATGCAGCTGCCTCTGCCCAACCTGGACGGCTCCAACACCCCGGGGCCGCTGTCCCCCGACCCCCAGAAGACATAGCGGACGGGCCTGCTCCCCCAGCTGAACTTTGACCCGAGGCCGCGGCACGTTAGGACGCTTCACAATAGATTGCAGCCGGCCTCGATGGGGGACAGGGGGTTACTGGGGAAAGAGACAATCGCGCCGGCTCTAATTTAACAAAATCTGATGTTTGGGTGCCAGAGCTGGGTCAGCCACTCTGTTCTAGAGGACAGATGTTTCGGGAGGTGTTTTTTCGGTGCTactgagagatagagagagagagggagggaaagagagagagggagagaggacgAGAGGACAGAGAACTCAGCCAGCCAAACCGACCACAGTGTTTTCAGATCTGTTGCTGCCGGGCTGCTCTGCCCTCGGGGACATCATCTGTACGTGGTGAGCTCGGTGGCACTGCTGCGCCGCTGTGACTGTGGCTGTGGAGGAGGCCGGGGCAGGAGCGGCAGGCCGGCTGATCGGGGGTTCTAGCGGGGGGGGTGCCTCGGTGCCGCGAGTCGGA

Function

GO: NA

KEGG:

id description
K04376 ELK4, SAP1; ETS domain-containing protein Elk-4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013955 True 1765 mRNA 0.65 5 48160674 48165662

Neighbor

gene id symbol gene type direction distance location
AMCG00013948 NA coding downstream 112608 48031392 ~ 48048066 (-)
AMCG00013950 NA coding downstream 136342 48022064 ~ 48024332 (-)
AMCG00013949 NA coding downstream 146423 48005699 ~ 48014251 (-)
AMCG00013947 slc41a1,LOC107698497,LOC106565625 coding downstream 159603 47979589 ~ 48001071 (-)
AMCG00013945 NA coding downstream 253508 47869425 ~ 47907166 (-)
AMCG00013954 NA coding upstream 7710 48173372 ~ 48176981 (-)
AMCG00013956 NA coding upstream 14233 48179895 ~ 48180577 (-)
AMCG00013958 NA coding upstream 20625 48186287 ~ 48189302 (-)
AMCG00013957 NA coding upstream 36917 48202579 ~ 48212028 (-)
AMCG00013959 NA coding upstream 54570 48220232 ~ 48227111 (-)
G47917 NA non-coding downstream 143836 48016561 ~ 48016838 (-)
G47839 NA non-coding downstream 465780 47689845 ~ 47694894 (-)
G47809 lrrn2,LOC108425772 non-coding downstream 615083 47540563 ~ 47545591 (-)
G47807 NA non-coding downstream 664990 47495411 ~ 47495684 (-)
G47766 NA non-coding downstream 933420 47225801 ~ 47227254 (-)
G47991 NA non-coding upstream 13605 48179267 ~ 48179685 (-)
G47995 NA non-coding upstream 50213 48215875 ~ 48216209 (-)
G48021 NA non-coding upstream 103682 48269344 ~ 48270564 (-)
G48025 NA non-coding upstream 111074 48276736 ~ 48277321 (-)
G48044 NA non-coding upstream 142902 48308564 ~ 48344493 (-)
G47896 NA other downstream 185759 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 291811 47864850 ~ 47868863 (-)
AMCG00013932 ruxe,snrpe other downstream 959777 47188595 ~ 47200897 (-)
G47666 NA other downstream 1285304 46871869 ~ 46875370 (-)
AMCG00013903 NA other downstream 1849556 46299161 ~ 46311118 (-)
AMCG00013964 NA other upstream 200381 48366043 ~ 48375096 (-)
AMCG00013967 NA other upstream 290241 48455903 ~ 48479577 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other upstream 652321 48817983 ~ 48821156 (-)
G48373 NA other upstream 1318838 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 1329065 49494727 ~ 49498630 (-)

Expression


Co-expression Network