AMCG00013957


Basic Information

Item Value
gene id AMCG00013957
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48202579 ~ 48212028 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013957
CGCGACCTgcagtttcagtttgttttaatcaccATTTTGTGAAGCTGAGggtaaaattcaaataaaaccccctttaaaacacattttatttttttatttttttggttcgGCTCAGAAACTGGGCTGCATTTTTCGCCGAGGCCGTTCCGCCGAGCAAAAACCCAGCGCTTTTATCCTTTTCCTTTATTTGCCTCGGGATtctccttttttatatattttttaacctctACAGTATTTCTGCAAAATGTCAAGACCAGTAAGgaacAGGAAGGTGGTGGATTACTCACAGTTCCAGGAGTCCGATGATGCAGATGAGGAATACGGGAGAGACTCGGCGCCCCCCAGCAAGAAGATGCGCTCGTCTCCCCGCGAAGTGAAGCACAAGAAGAGATCGGGGAAGAACTCGCAGGAAGACAGcGAGGATTCAGATGACAAAGTGTCCAAGTCCAAAGATGACTCTGCAGACGATTTCGGCAGTGAAGAAGACAACGACTTtgaaggggaggaggaggagggcgaggGGGGGGACAGCGACTACGACAGCTCGAAAAAGGGCAAAAAGGGAAAGAAGCCTAAACTGGAGAGGACGCCCAAACGCACGGCCAGACTACGGAAAAGACCAGCAGAAGACAGCGATGAAGACACAGAGGTCAGCAAGAAGGTGCGGCAGCAGCGCCAGGCTGCGTCCAAGGCCGTGTCCAAGCAGAGGGAGATGCTGCTGGACGACGGTGGCAGCGAGGACGAGGAGAAGGACGAAGATGAACAGGCCTTCCTGGACAAGGAGTCGGGTAGCGACGAAGACTTCATGGTCGACGATGACGACGACAGTGACTACGGCCACTCCCGGAAGAGGAGCAAGAAGGTGATGAAGAGGAGCAAGCCTGACAGGAGGGAGAAGAAATCCCCCAAACCCCGACTAAAAGCCACCGTGATCCCCAGCCCCATGaagggcaagggcaagggcaGGCCCAGCGCGGCTAAGGCCTCGGAGAAGTCCTACTCCTccaaagaggaggaggagccggAGAGCCCccccgaggaggaggaggaggaggaggaagaagaggaggagcccgaggtggtggtggagaagaagaagaaggagaaggagtcCCCTCCCCCAAAGAAAGCGGAAGAAGCTGccgaggaggaagaggaggagtcGGAAGAGGAAGCTCCTTCTGGGGAGGACTAACCCTGCTGCAGTGGGAGTCTCTCTCgtccttttttcttttcgtttCCCCCCGTTTTTCCCCTCCTattctcctcccctcccccccctccgATGTCAGCCTGGCTCAATGGTTtggacagtttgtttttaaatctgtgctttttctttcGGTTTTGCTTGTAAATACCATATCTCAAAGGACTTtcactgtgtgagagagagtgtgtgtgggagaCTGAACTGGGCAGATCTTACCAATGCAGGTGCATGAACTTAGTCCtggttgatttgttttgtttgcttctaTATCACTTTTAATCCCCAATGTCACGAGTTGTTCAGTCAGCAGGAGATGCACAGGAGGCCGTTACTGGGGGGCACTGTAGGACCCTGAGCACCAGCTAGTATTTTCTGTAGAGCGACCAGAGCTACACAAAACTAGTATTCGTGAAGTTCGGACCCACTTACAGGTTCCCAAGTCGTCTTGCATACGAGTGAGGTCCCCTGTGTTTTTCCATCTCATTACTTTAAACTTTCTTTCCAATCTTATTATCATGTATCTTTTAACCGAAGACCAGTTCTGCATGCTGTGAGAACCTGCCAATGAACGCTaaaaacaaacctttaaaaACCTGATTATCTGACGATCACGCCCCCTGGTTTTATTTGCCAGCTGCTAATTAATCCACACGGATTCCAGCCCGATCGGCCCAGTCAGGTTCGGCCCGGCGCTCGAGTGACGGTGCTGTGCAGCTCTGAGTGTGAAAGCCGTGCCGCCCaggtgtgagtgagtgtgtgagtgtgagtgtgagtgtgtgtgttagatgTACTCCTGTGAATGTAACCCGGCCGCGCCTGTCCTGTGATCGAGTCCGGGGTGTTGTTACAGACGGGGGGGAGTCGGGCCGCTCCTCTCTGGGTCCCCGGCTGTGCTCTCGACCCCTGCTTGGTTGAAGCCCCTTGTATAACACTATCCTTCTCCGGTGAAGCCGGACAGCGCTCTGCTCTGCTGCGCTCCTACGGCATTAGCGAGCCCAGTCCAAGCCCACGCTTGGCCAGTGCCAGGTCCGAGTGTTTGAAGGAAGTGGGATTTAATTTGCCAAACCACTGAGCTTAAACACCTGGACCTAACGGTTAAcaaccttgttttgtttttccacacgGGGAtCAGGAAATATTCTTTTGAAACTTTGACATgtaagctgttttttttgtttcttctgatggaactttcaaaatgtgtattgttgAATCTCAATGTATattgcatcatttattttatttttttaattattcctgCCCATCCCCACCTATATATCTGaactggggggggggcggggagaTGCTATAAAGCCAGTGTGTTACAGcgtgcatctctctctgtcatgCATAGTTggcaatgttgtttttctttagtcTTCATTGTCTTTGCAATAAAACCGAGCTCAGAAATGGTTAATCCCTGAAaggtgtttaaataaaaacattaaagaaataaataaatgtagagcTGCGATAgtgacttatttttattatgctaCACGTGGCAGGAGAGCCCTGTGCCGATTGTGTATCGAAATCCTGGGGCAGAGGGCCAGTCAGGCCTGAGCTGGTACTGACCCGAGTGTCccttttgtctgtctgtctgtgtgtgaactTCCTCTTCCTGGCTTAGTGTCGAGACGCCCGTGAGCTCCGAGGTTGTCCTCAGACCGGTGTGTGTTGTGGCTTTAGGGTTGGGCATAAGCCGTGCTCGCTCAGCACCGGTATATTGACTGTTTTGTTGTTCAAGTTCAATCCCT

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013957 True 2976 mRNA 0.50 9 48202579 48212028

Neighbor

gene id symbol gene type direction distance location
AMCG00013958 NA coding downstream 13277 48186287 ~ 48189302 (-)
AMCG00013956 NA coding downstream 22002 48179895 ~ 48180577 (-)
AMCG00013954 NA coding downstream 25598 48173372 ~ 48176981 (-)
AMCG00013955 NA coding downstream 36917 48160674 ~ 48165662 (-)
AMCG00013948 NA coding downstream 154513 48031392 ~ 48048066 (-)
AMCG00013959 NA coding upstream 8204 48220232 ~ 48227111 (-)
AMCG00013965 NA coding upstream 49319 48261347 ~ 48264373 (-)
AMCG00013966 NA coding upstream 216875 48428903 ~ 48439128 (-)
AMCG00013972 NA coding upstream 304905 48516933 ~ 48520737 (-)
AMCG00013973 NA coding upstream 310522 48522550 ~ 48524089 (-)
G47991 NA non-coding downstream 22894 48179267 ~ 48179685 (-)
G47917 NA non-coding downstream 185741 48016561 ~ 48016838 (-)
G47839 NA non-coding downstream 507685 47689845 ~ 47694894 (-)
G47809 lrrn2,LOC108425772 non-coding downstream 656988 47540563 ~ 47545591 (-)
G47807 NA non-coding downstream 706895 47495411 ~ 47495684 (-)
G47995 NA non-coding upstream 3847 48215875 ~ 48216209 (-)
G48021 NA non-coding upstream 57316 48269344 ~ 48270564 (-)
G48025 NA non-coding upstream 64708 48276736 ~ 48277321 (-)
G48044 NA non-coding upstream 96536 48308564 ~ 48344493 (-)
G48047 NA non-coding upstream 117690 48329718 ~ 48339610 (-)
G47896 NA other downstream 227664 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 333716 47864850 ~ 47868863 (-)
AMCG00013932 ruxe,snrpe other downstream 1001682 47188595 ~ 47200897 (-)
G47666 NA other downstream 1327209 46871869 ~ 46875370 (-)
AMCG00013903 NA other downstream 1891461 46299161 ~ 46311118 (-)
AMCG00013964 NA other upstream 154015 48366043 ~ 48375096 (-)
AMCG00013967 NA other upstream 243875 48455903 ~ 48479577 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other upstream 605955 48817983 ~ 48821156 (-)
G48373 NA other upstream 1272472 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 1282699 49494727 ~ 49498630 (-)

Expression


Co-expression Network