AMCG00013998


Basic Information

Item Value
gene id AMCG00013998
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49312310 ~ 49317429 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013998
GCTGTGTCACTGGAGAGGCAGGTAGgctggagcagagagagagagagtgtaagagacagagagagagagacagaccgaCGCTATGCTgctgctctctgtgctgtggGCTGTGCTGGTTGGCCTCGAGGGGGTGTGGGGTCGTGACCTCACCGATGAGGAAAGACGTATCATCGTGGAGAAGCACAACCGCCTGCGAGCAGCCGTCGACCCCAGCGCCACCAACATGAAGAGCATGAGCTATGGGCAGGATCTGGAGGAGATAGCAGCGCAGTATGCGACCAAGTGCATCTGGGATCACAACCCCGCCCTCAAGGACATCGGCGAGAACCTGTACCTGCGCAACAGCAGCCTGGACGTGGGCATGGCCATGGACAAGTGGTTCCTGGAGCACCAGGATTACACCTACGACACTGGCCACTGCCAGCCGGGCAAGATGTGCGGACACTACACCCAGCTGGTGTGGGCCAACAGCAGCAGGGTGGGCTGCGGAGCGCATTACTGCAGTGAGGTGCAAGGGCTGGACTTCTCCGGGACCATGCTGGTCTGCAACTACTCACCcaaAGGCAATTACATAGGAGAGAAGCCCTATGAGGAGGGGGAGTCCTGCTCCAGCTGCCCGGCCCAGCACCACTGCCTGGACAACCTGTGTGTGCCGGACAAGCCCGAGACGACGACACCGGAGTGGACAACTACAGCGGACTGGAAAGAGAGCCCGCAGGGAGATACGGACTCCCCACCGTCCACGGGCATGACACAGGATGACTCGGGGACCCCCTCCTCCTCAGACCAGCCTGAGGAGGACGGACAGACCCCCGCTTCATCAGAGGAGCCCTTCACATCGTCACAGCAGCTCCCAGAGGGCGCTGAGGATCGGTGGGAGCGAGGAGAGGCGGGCAGACCGGTGTCTCACTGGACTCTCTGCCTGCTGCTCACACTGCTGCTGGGGCTGGTCATGACATGAGTgaccagacagacacagacacacacacaacacacacacacacacacacacacacacacacacacacacaacacacaacacacacacacaattcttaAGACCCTGTATTCTGTGTTCTCTTCCACctgtctttaaatgaattaagtaAATAATGAGTTCAACTCCAAAACACTTACCTTTAATCTGGATTAGTTTGCTGTACAGATTCAAAATCTTCATCTGTTTCTGGagccaaaaacaattaaaatgtttgaattgtCTTGTTAGGTCAATTTAGGGTATCATCATTGGAGTAGCTTTAGGGGGAGTgatgttgagagaatgttaaattgtctCCCCCAGTAATGTCTGCCTGGCTCCATATGGGTAGTGGACGATATTGATCCCCCCTCCCGCTTGACAACTCTGCACCCTCCCGCTCGACAACTCCGCAACCAACCCCACCTACAGAAGACCCGAAATACATGTCCCCCCAGTTCTGAAAACAAACCTTTGCCACTGGGTTTAATCAAACAGCCAGAAGACAGtgtgtcaatcaatcaatcaatcaatcagtcagtcagtgttgaTTTGCTGTAGTGCCCTTCTCAAATGTGTGCACCGGGGACTGGTTCCCAGACCCTCAGTACAGGAAGTGGGAGTGGGAGCTGCGGGGCTAGAGAttcaaatgaacaacaataataataattgcagaaGCATGGCATCAGTTGTAAATCATATCCTG

Function

GO: NA

KEGG:

id description
K20412 PI16, CRISP9, CD364; peptidase inhibitor 16

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013998 True 1685 mRNA 0.54 6 49312310 49317429

Neighbor

gene id symbol gene type direction distance location
AMCG00014003 NA coding downstream 2185 49302622 ~ 49310125 (-)
AMCG00014000 NA coding downstream 13593 49293127 ~ 49298717 (-)
AMCG00013994 gnat2,LOC107591823,LOC102304204,LOC100703259,LOC102200492,LOC101158106,LOC103367853 coding downstream 386397 48918397 ~ 48925913 (-)
AMCG00013990 NA coding downstream 459340 48851288 ~ 48852970 (-)
AMCG00013986 NA coding downstream 504723 48795219 ~ 48807587 (-)
AMCG00013999 NA coding upstream 2742 49320171 ~ 49326142 (-)
AMCG00014002 NA coding upstream 10013 49327442 ~ 49330861 (-)
AMCG00013997 NA coding upstream 29855 49347284 ~ 49352698 (-)
AMCG00014001 itpr3,LOC106572092,LOC107731245 coding upstream 37533 49354962 ~ 49385651 (-)
AMCG00014007 arl8a,LOC107671521,LOC107569762,LOC105900530,LOC107750681,LOC107722853 coding upstream 139198 49456627 ~ 49463170 (-)
G48275 NA non-coding downstream 261878 49027284 ~ 49050432 (-)
G48175 NA non-coding downstream 661081 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 766035 48545237 ~ 48546275 (-)
G48092 NA non-coding downstream 806174 48505871 ~ 48506136 (-)
G48086 NA non-coding downstream 828000 48479448 ~ 48484310 (-)
G48363 NA non-coding upstream 36263 49353692 ~ 49354535 (-)
G48370 NA non-coding upstream 135604 49453033 ~ 49453872 (-)
G48398 NA non-coding upstream 220299 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 296267 49613696 ~ 49613974 (-)
G48433 NA non-coding upstream 300848 49618277 ~ 49618955 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 491154 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 832733 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 937214 48366043 ~ 48375096 (-)
G47896 NA other downstream 1337395 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 1443447 47864850 ~ 47868863 (-)
G48373 NA other upstream 167071 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 177298 49494727 ~ 49498630 (-)
G48506 NA other upstream 402336 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 404317 49721746 ~ 49724237 (-)
G48510 NA other upstream 411075 49728504 ~ 49729055 (-)

Expression


Co-expression Network