AMCG00014003


Basic Information

Item Value
gene id AMCG00014003
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49302622 ~ 49310125 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014003
ATGGACTGGATTACTCTgggtctctgtctgtgtgCCTTAGAAGTGGGGGCCTACAGACCCATCTCAGGCCCGGAGAAGACAAACGTGCTGAGGGGGGGGTGGGTCTCTGTGCAGTGCCAGTACGACACCGTGTTTAAGGAAGACGTCAAGTTCTGGTGCAAAGGGCCCTCTATTGACAGCTGTCAGTCTATAGCGACTACAGCTGAAAGCCGTGACCCTGGAGACCACAGCACATCCCTCACTGATGACAGAGAGCAGGGCCTCCTGTCTCTCACTGTGCACAGGGTCAGAAGAGAGGATGAGGGATACTACTGGTGTGTGATTGagagacacacagcacacagactgCACATCAGAGTTACTGAGGTCCCCCCGGTGAAGACTGGAGAGATAGGGGGCTCCCTGACAGTGCAGTGTGACTACAGCCTCGCTCTCACAAGCACCATTAAATACTGGTGCAAGAGAAAAGACCAAAGCACCTGCAAGACTTTGGCAAGAACTGATGGAGGGAGTTTGGATCAGAACAGGGTGTCCATTTCGGATGATAGAGCAGGGCTGGTTTTCACTGTAATCATGCGCAGTCTGCCGTGGAACGATGCGGGTTGGTACTGGTGTGGCTTACAACAGACTGGACAGGATACGATGGAACCAGTGCTGATAGAAAACACTGAAGGTCAATGTACGAGAGCAAGAGGCAACCCGGAAAGCTCCTATGAGACAGACCCGAGGATGGAAGAGAATGTAGTCTACATCACGGTGACGGCGACTGACAGGGGGGCCCTGGTGGACACAGAGCTGTACAACACACCTGCCAACACACAGCAGAGGCACCAGGCCGAGCAATCTGTCATTTACACAACTCTGCAGAAAACCACAGCCGGGGAAGAGAGCTGCGACCTTCGGCAGCTGGAGGTGACCTACATGACAGTGATGGCAGTGAGCAGGACACAGCCCCAGAGAGACAGCAGCACCTACGCCAACATCAGTCATCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014003 True 996 mRNA 0.54 6 49302622 49310125

Neighbor

gene id symbol gene type direction distance location
AMCG00014000 NA coding downstream 3905 49293127 ~ 49298717 (-)
AMCG00013994 gnat2,LOC107591823,LOC102304204,LOC100703259,LOC102200492,LOC101158106,LOC103367853 coding downstream 376709 48918397 ~ 48925913 (-)
AMCG00013990 NA coding downstream 449652 48851288 ~ 48852970 (-)
AMCG00013986 NA coding downstream 495035 48795219 ~ 48807587 (-)
AMCG00013987 NA coding downstream 509747 48792374 ~ 48792875 (-)
AMCG00013998 NA coding upstream 2185 49312310 ~ 49317429 (-)
AMCG00013999 NA coding upstream 10046 49320171 ~ 49326142 (-)
AMCG00014002 NA coding upstream 17317 49327442 ~ 49330861 (-)
AMCG00013997 NA coding upstream 37159 49347284 ~ 49352698 (-)
AMCG00014001 itpr3,LOC106572092,LOC107731245 coding upstream 44837 49354962 ~ 49385651 (-)
G48275 NA non-coding downstream 252190 49027284 ~ 49050432 (-)
G48175 NA non-coding downstream 651393 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 756347 48545237 ~ 48546275 (-)
G48092 NA non-coding downstream 796486 48505871 ~ 48506136 (-)
G48086 NA non-coding downstream 818312 48479448 ~ 48484310 (-)
G48363 NA non-coding upstream 43567 49353692 ~ 49354535 (-)
G48370 NA non-coding upstream 142908 49453033 ~ 49453872 (-)
G48398 NA non-coding upstream 227603 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 303571 49613696 ~ 49613974 (-)
G48433 NA non-coding upstream 308152 49618277 ~ 49618955 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 481466 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 823045 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 927526 48366043 ~ 48375096 (-)
G47896 NA other downstream 1327707 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 1433759 47864850 ~ 47868863 (-)
G48373 NA other upstream 174375 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 184602 49494727 ~ 49498630 (-)
G48506 NA other upstream 409640 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 411621 49721746 ~ 49724237 (-)
G48510 NA other upstream 418379 49728504 ~ 49729055 (-)

Expression


Co-expression Network