AMCG00014033


Basic Information

Item Value
gene id AMCG00014033
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49721746 ~ 49724237 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014033
CCGCTCTCCAGCCACTGTGCGCGGGTCACATGACCCCGGAGTCCCTCTTAAAGGCGCAGCGAGCGCAGAGCTACATCCCCGTATGAAAGCCTGAGAGCCGCGCCGCGCCGATTCCCTCCAGCGTCCACGCACGACGCCCGCACTGCTTTAAAGCTGCAGTCGCAGTAGTTGTATTACCTATGAATCGCTGACTCTCATCCACTGGTGGGTGACAAGATTGTCATCTCCAGAAACGGCgccatgtatttattattactaatgaTACCACTGACGCTGAGGATATTCGACGCTCTTGTACATCATACACTCCGCTCATGAGCGGCGCAGGGACTCGTATATGCCTGTAGTGCAGTTTGTTTCCGGACCCTTTTCAGCGGCGCACCGGGCGGAAGCAGCTCGTTGTTGTGGCGCACACGTCCGGTGCTCTTGAGTGCGCGAGGCCGGGTGTCAGTGCAGCGAGCCGCGGAGCAGCGAGGATGAAGGCCGCGCCGAGAGCAGTGGAGCCCAGGCCCTCCGGGGTGAAGGAGTGGGTCAGCACCGCCTTCCGCTTCGCCACCGACAGGAACGACTTCAGAAGGAATCTGCTGGTTAATGTGGGTCTGTTCGCAGCCGGGGTCTGGGTCGCCAGGAATCTGTCCGACTTCGATCTGATGTCCCCGCAGCCCCTCTCTTAACCGCGGGGAGGAGGTGAGGCAGCTGTCTGAGCCGGGGAGGTAAGAGCGACACGCCGCCGCGGTGCAGCGAGGCCTGGCGATCCGGATCTCGTCAGCCATTTCACAGAGCGGCACCAGGGGCTGCGCTGTGTGTGCACCCAGCTGCCCAGAGTACGTGtggggtggtgtgtgtgtccagAGTACATGTGGggtggtgtatgtgtgtgtgtgtccagagtACATGtggggtggtgtgtgtCTGTCCAGAGTACGTGtggggtggtgtgtgtgtccagA
>TU60602
GGGCGGAAGCAGCTCGTTGTTGTGGCGCACACGTCCGGTGCTCTTGAGTGCGCGAGGCCGGGTGTCAGTGCAGCGAGCCGCGGAGCAGCGAGGATGAAGGCCGCGCCGAGAGCAGTGGAGCCCAGGCCCTCCGGGGTGAAGGAGTGGGTCAGCACCGCCTTCCGCTTCGCCACCGACAGGAACGACTTCAGAAGGAATCTGCTGGTTAATGTGGGTCTGTTCGCAGCCGGGGTCTGGGTCGCCAGGAATCTGTCCGACTTCGATCTGATGTCCCCGCAGCCCCTCTCTTAACCGCGGGGAGGAGGTGAGGCAGCTGTCTGAGCCGGGGAGATGCTCATGACCAAAGTGCTGGAAAGGGGACTTGACGTGGACAGAGGACTGCGGGGCCACAGGGCCCAAGACTCgtcactgtactgtgttgtcATTATTTAAGGAATGCAATAAAGCATTGTGTGAAGTGTAGC

Function

GO: NA

KEGG:

id description
K17772 TOM6; mitochondrial import receptor subunit TOM6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014033 True 950 mRNA 0.61 3 49723075 49724237
TU60602 False 464 lncRNA 0.61 3 49721746 49723854

Neighbor

gene id symbol gene type direction distance location
AMCG00014035 NA coding downstream 18373 49697861 ~ 49703373 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding downstream 27582 49689679 ~ 49694164 (-)
AMCG00014024 NA coding downstream 41384 49678320 ~ 49680362 (-)
AMCG00014023 NA coding downstream 114552 49595783 ~ 49607194 (-)
AMCG00014012 NA coding downstream 162986 49557804 ~ 49558760 (-)
AMCG00014036 NA coding upstream 26231 49750468 ~ 49757241 (-)
AMCG00014046 NA coding upstream 59035 49783272 ~ 49788746 (-)
AMCG00014048 NA coding upstream 67106 49791343 ~ 49794766 (-)
AMCG00014047 NA coding upstream 72609 49796846 ~ 49804601 (-)
AMCG00014045 NA coding upstream 89812 49814049 ~ 49818276 (-)
G48494 NA non-coding downstream 45996 49663092 ~ 49675750 (-)
G48439 sars,LOC107697960,LOC107671868,LOC107706967 non-coding downstream 93979 49623810 ~ 49627767 (-)
G48437 NA non-coding downstream 98555 49622097 ~ 49623191 (-)
G48433 NA non-coding downstream 102791 49618277 ~ 49618955 (-)
G48430 NA non-coding downstream 107772 49613696 ~ 49613974 (-)
G48508 NA non-coding upstream 1498 49725735 ~ 49726249 (-)
G48509 NA non-coding upstream 2051 49726288 ~ 49727007 (-)
G48512 NA non-coding upstream 9672 49733909 ~ 49734172 (-)
G48517 NA non-coding upstream 24352 49748589 ~ 49749282 (-)
G48506 NA other downstream 220 49719765 ~ 49721526 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other downstream 223116 49494727 ~ 49498630 (-)
G48373 NA other downstream 236979 49484500 ~ 49484767 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 900590 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 1242169 48455903 ~ 48479577 (-)
G48510 NA other upstream 4267 49728504 ~ 49729055 (-)
G48516 NA other upstream 20709 49744946 ~ 49747551 (-)
AMCG00014043 tmcc2 other upstream 140085 49864322 ~ 49930152 (-)
G48570 tmcc2,LOC106583086,LOC106565656 other upstream 146756 49870993 ~ 49918397 (-)

Expression


Co-expression Network