AMCG00014047


Basic Information

Item Value
gene id AMCG00014047
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49796846 ~ 49804601 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014047
ATGGCAGTTAACACCCCTGTCTCGACCCACAGAGTCCCTCTGAAGAGGTTCAAGTCCATACGTGAGCAGATGAGAGCACAGGGGAAGCACCTCCCGTACTCAGACCCCGGACTGAAGTACCAGCCCTACTCCTTCGCCAGCTCTGCCAATGAGCCCCTTAACAACTATGCTGACATGTCCTACTATGGAGCCATCAGCATTGGCACCCCGCCCCAGTCCTTCCAAGTCCTGTTTGACACAGGATCCTCCAACCTGTGGGTGGCATCTGTGTACTGCAGCAGCCAGGCCTGCACGAACCACCCCACTTTTGACCCCCGCCAGTCCTCTACCTACTCCAGCAATGGCCAGACCTTCTCCCTGCAGTACGGCACCGGCAGTCTGACTGGCGTGTTCGGCTACGACACCGTCTATCTCCAGGGCATTACCATCACCAACCAGGAGGTGGGTCTGAGCACCAACGAGCCGGGCACTAACTTTGTGTATGCTCAGTTTGATGGCATCCTGGGCCTGGCGTACCCCCAGCTGTCAGCTGGCGGCGAGACTCCTGTGATGGACACCATGATGCAGGAGCAGCTGCTGCAGTACAATTTGTTTGCCTTCTACCTCAGCAGTGATGAGCAGCAGGGCAGCGAAGTGACCTTCGGAGGGGTTGACCAGAGCAGATACACCGGCGAGATCGTCTGGGCGCCCGTCACCACTGAGCTGTACTGGCAGGTCGCCATTGACGGATTCTTCGTAAACAACCAGCAGACCGACTGGTGTAGCCAGGGCTGCCAGGCCATCGTGGACACAGGCACCTCTCTGCTCACCTGCCCTCAGCAGTACCTGGGATACCTGCAGCAGTACATTGGTGCTCAGGCCAATCAGAACGGAGAGTACATTATCAACTGCAACAACCTGGGGAACATGCCCACTCTGTACTTCACCATCGGCGGCCAGAACTTCGCCCTGCCTCCCTCTGCCTACACCATTGTGCTCCTCATCAGGACAGATGttgtgtttaatgcattttcccCAGATAGTGTAACTGAATGTGCTTCTCTGGTGTCTCTGCAGCGAAACCAGAACGGATACCAGTATTGCACCAGTGGCATCATGGGAACCTACCTGCCCTCTCAGAACGGCCAGCCCCTGTGGATCCTGGGAGATGTGTTCCTGAGGGAGTACTACTCTGTCTATGACCGACAGAACAACAGAAAGGCTCCAGTAGGCAGCTGCGGATTGCTTACCCTCTCTGCCTCCCCGATGAACCCACGGTCTGTCATGGGGCCGAGCCTGCTGCTCCTGATGACTCTGGTGACAGggtgGTGTGCGGAGGGTCCGACGCAGGAGCTGAGGGTGCCGCCAGGGGGCAATGTGACCCTGCACTGCCGCTACAGCATCCCCAGGTACCGGCTGCATGTCAAGACCTGGAGCCGACGGAAGGACATCGATGGCTTCGAGCCGCTGGCGGACACCAACGGCTACCTGGCTCTGAGCCACCGCGGACGGCTGGCCATCACCGACTTGAAGAAGAGCGGGATGGTGTCGGTCAGCATGACGGCGCTGCGGGAGAGTGACTCAGGGGAGTACTGGTGCGCCGTTAGGATGCTGTACGGCGTGGAGGGGCTGAGCTGCGTCACACTGCACGTCTCTGCTGGTGGAAACCCAGGCTCAGAAAGTAGTGGAACAGCTCAGCCTGAAAGCCTGCTGCCTGTGGCTCGGGAGACACTCAGCAGCGCAGCCGGCCGGCAGGGGGGCGGGCACCTCTGGGGGGTCTTGCGTTGGGTCCTGTTCAGCGTGATGGTGGTGTGTCCAGTGCTGGTGAACATCATAGTGAGGTCCTGCAGAGGATCGCGCCGCAGCGAGGGGAGCAGTGCTAACGCAATGACACAGTGCCAGCAGTGTGAGGGCGTGGCCTTCGTTGCTGGTGGGACTTTCTTCTGCGACGCACAGGAGCCACGGACTGAAGGGGCCTGCAGCTTCACAGGGTACAACGGCAACATATCAAATGCGACATGAATGCCTAAAGCGTGTGCTACAGACACAAAACTTAGTTATAATTTTGTCTTCTTTGTGAACGTGCTGCAGAAGTTTATGATGATCAAAAACATACACGGGTGATCGCGCCTACTAATGTCAGCAAAGACATTCGTCCGGGTGGAAGAGTGAAACTGGTCCCTTCTTCCTGTTTCATCTTCCTTCAATCAGCTGGACAATTTACAGTTTTCCTATATGCGGAATTGGTGTTTGACAcactaaaaatatgtaattgaaaatatagtttaaagAATAGTATGAATTAAACTCACTGATTCAATGATTGTTTAATGTGAAGGGAATTAATATGTCTGACTGCAGATATATACACCTCATTGATCAATATGGGTTTCCTGTTTACTAGTGAAACCACATCTTTTTACTTTGGATTTAGAGTATAAATGAATGGTGTCAACTattaatgttttctgcattaGTTTTTCTATccatattaacaataatacaattataatactaAGTGCATTGTGAAGAAATGAAAaactttgtttgtattttgatataaatcagcaaatgtaacaaatgtatccttgttttgttcagacactttcatatatattttctgtcataGTTATTTACTATACAAACCATGCATTAAGCTTAAAGAACCTCTTACTAATGTATTCATCTATACAGTATATGCCCCATGGCGTTATTTGCAATACAGTGCTGCCTGAGAGGTGTGGATGACGTGGCATTATAGCTCATTTCAGATACAAGGAAGGTTACAACTCCCTGGATCAAGTCCCGCTGCACTGTGCTCTGTTCCAGCTGAAGAGATTCAATGTCTTCAATCTGCCCCAATCTAagcatcccatcatgctctccTCTGATCTGCTTCCAGAGCTGCACTCTTgcagaaataaaagcagttttccagatgaggtctaat

Function

GO: NA

KEGG:

id description
K01377 PGC; gastricsin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014047 True 2929 mRNA 0.52 14 49796846 49804601

Neighbor

gene id symbol gene type direction distance location
AMCG00014048 NA coding downstream 2080 49791343 ~ 49794766 (-)
AMCG00014046 NA coding downstream 8100 49783272 ~ 49788746 (-)
AMCG00014036 NA coding downstream 39605 49750468 ~ 49757241 (-)
AMCG00014035 NA coding downstream 93473 49697861 ~ 49703373 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding downstream 102682 49689679 ~ 49694164 (-)
AMCG00014045 NA coding upstream 9448 49814049 ~ 49818276 (-)
AMCG00014042 dstyk coding upstream 15879 49820480 ~ 49831371 (-)
AMCG00014041 NA coding upstream 84685 49889286 ~ 49901963 (-)
AMCG00014044 NA coding upstream 126559 49931160 ~ 49934490 (-)
G48517 NA non-coding downstream 47564 49748589 ~ 49749282 (-)
G48512 NA non-coding downstream 62674 49733909 ~ 49734172 (-)
G48509 NA non-coding downstream 69839 49726288 ~ 49727007 (-)
G48508 NA non-coding downstream 70597 49725735 ~ 49726249 (-)
G48494 NA non-coding downstream 121096 49663092 ~ 49675750 (-)
G48516 NA other downstream 49295 49744946 ~ 49747551 (-)
G48510 NA other downstream 67791 49728504 ~ 49729055 (-)
AMCG00014033 NA other downstream 72609 49721746 ~ 49724237 (-)
G48506 NA other downstream 75320 49719765 ~ 49721526 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other downstream 298216 49494727 ~ 49498630 (-)
AMCG00014043 tmcc2 other upstream 59721 49864322 ~ 49930152 (-)
G48570 tmcc2,LOC106583086,LOC106565656 other upstream 66392 49870993 ~ 49918397 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location