G43712


Basic Information

Item Value
gene id G43712
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28738123 ~ 28738753 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54489
ggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgtaggcgctttcagcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgacgcACTGTGacttctgacacctttctatcggaaccagcattaactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcgctccccacgtgcatcagtgagccttggccgccatgaccctgtcgccggttcaccgcttttccttccttggaccacttttgataggtactgagcactgcagaccgggaacaccccacaagagctgcagttttggagaggcccttgtcaaagtcactcagatccttactcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgtctaatatatcccacccactgacaggtgccatgataacgagattatcagtgttattcacttcacctgtcagtggtca

Function

NR:

description
PREDICTED: kinesin-like protein KIF14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54489 True 598 lncRNA 0.52 2 28738123 28738753

Neighbor

gene id symbol gene type direction distance location
AMCG00013338 NA coding upstream 4452 28727573 ~ 28733671 (+)
AMCG00013337 NA coding upstream 21711 28704047 ~ 28716412 (+)
AMCG00013333 NA coding upstream 114612 28611303 ~ 28623511 (+)
AMCG00013334 NA coding upstream 127728 28610105 ~ 28610395 (+)
AMCG00013335 NA coding upstream 131240 28599903 ~ 28606883 (+)
AMCG00013340 NA coding downstream 56993 28795746 ~ 28799306 (+)
AMCG00013341 rptor coding downstream 102999 28841752 ~ 28914840 (+)
AMCG00013342 NA coding downstream 180000 28918753 ~ 28936041 (+)
AMCG00013343 LOC103354899,LOC102794595,LOC101480902 coding downstream 230775 28969528 ~ 28970154 (+)
AMCG00013345 NA coding downstream 265292 29004045 ~ 29011275 (+)
G43673 NA non-coding upstream 348163 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1320336 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1727472 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 1807870 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 1952562 26784953 ~ 26785561 (+)
G43810 NA non-coding downstream 411225 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 417946 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 438298 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 440345 29179098 ~ 29202721 (+)
G43895 NA non-coding downstream 695297 29434050 ~ 29446698 (+)
AMCG00013336 NA other upstream 51985 28676542 ~ 28686138 (+)
G43682 NA other upstream 249340 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 665324 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 802185 27928708 ~ 27935938 (+)
G43476 NA other upstream 1147305 27589139 ~ 27590818 (+)
G43802 NA other downstream 365536 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 901870 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 1147009 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 1324627 30063380 ~ 30074748 (+)
AMCG00013388 NA other downstream 1344891 30083644 ~ 30090117 (+)

Expression


Co-expression Network