G44864


Basic Information

Item Value
gene id G44864
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33088902 ~ 33090447 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55927
TGtagcaattttaattttattttgattcatcAAATATCAATCCATAGTGCATTCATTTGCTAGCAGTTCTATTACCACcactttgttttcaaatttttgtttctgtactttcctttatttttttttcttctaaacagTTAAATGCATGGTCTACTTCAAATTCGATACGGATTTTATATGAAATGATTATCGTCACTTTAACAATGCTCTCAGTCAACCCCACCCTCTGTCCAGAAGGCAAATCCCATACAGTTCTCTCATTCTGATCGATTGTAAAAACCCAGCATGGCCAGCTTTCATTGGATATGTGACACttcccagaaaaataaaaattggatAGAATGAACTTGTGGATGAAAGGCACGACCTAGACCTCCAGGCAGGAGTTTAAGTCTCTGGAGGCTAGTGCATTAACATTAACAGCGACCCTACTATAGACTCCAGAATGGACCACAGGCTTCCATAGGTGAACAGGTGATGTATTCATTCTACTACAGATGCCCTGAATGGAGAGCCCTGGTGTCCACAGTTGATACGGTAATGCACTAGCATTGCTAACGTTTTTGTCCACTGGGACAGCAAATGCCTACAGGGTTTGGTTGTCCCCTAATACACAAGCATCGATAGATTTCGCTCACAGAGCTCACAATTCAGAAATATTCAGCCCCATGCCCACCcctcaaaacaaagaaattcagaaataacataacataaataaagctttcctcttttttaaaccacaaaacCCCACTTTCACAGTCAGACAGTACCTCTActataaaatgaagaaaataacatttgaataaCACTTTCCACATTTTATCCAGTTGTGCTTTTGTCCCCTTTACAGcagattttcttctttctttcagtcTTTCGCTGGGCAGTCCGACCTGACTGGTCTTGACACAGAACCAAGACAGTTCTCTCTGTCGCTAGGATGGTCGGTTATAGGATAAAGTGTCTCTAGGAAGGAATCTACAAAGTCCTTTGGGGGAGACCAGGCATTGATTGATTTTACGGTTCATCATTTAGAATCCAGTGGCAGGGGAGGGTGGTTCGAGGCTGTGGCGACTGCTTCATGTTCGGTCAGAACCATTAATaactcccctcctctccccagTGGTGTGCCAGTGCTGTCATTTCCACACAGCCTGGTCCCCTTCCTTGGCACAACCTCAAGCGAAAGAATAACTGCAAAGAAACCATTGGACAGCAGACTTTTTCACTATTCATCTAAGGACCATAGTTTTCATTAACCAGGCTTAAGTTACCTCAAGCATTTCACgacaagaaaatacaacacaatgtcTGACAGAAGACATCAGCGACTCCTCCATCTTTGATTCAGGTGTGACAGTGCAAAGCAGATATTCatgctccccccaccccccaagcCAGACTGGCATTTCAAAGCCCAAGTTTGGTCACTGCAGCCTTATTTTGCTACGTCTCAAGTTGCTGAATTGCCAACCTGCGTCATATCCCACTTAAGCCCCACATTACTGCCGAATTCACTTCATTCTCATCGGCTGCGTCTTTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55927 True 1546 lncRNA 0.42 1 33088902 33090447

Neighbor

gene id symbol gene type direction distance location
AMCG00013496 NA coding downstream 252304 32833847 ~ 32836598 (-)
AMCG00013489 NA coding downstream 467964 32609881 ~ 32620938 (-)
AMCG00013483 NA coding downstream 507599 32572426 ~ 32581303 (-)
AMCG00013484 clptm1,LOC107582636 coding downstream 523548 32545177 ~ 32565354 (-)
AMCG00013482 NA coding downstream 549076 32521650 ~ 32539826 (-)
AMCG00013507 NA coding upstream 6192 33096639 ~ 33108496 (-)
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding upstream 31525 33121972 ~ 33122871 (-)
AMCG00013506 NA coding upstream 39607 33130054 ~ 33143388 (-)
AMCG00013511 NA coding upstream 155717 33246164 ~ 33263876 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding upstream 264134 33354581 ~ 33366875 (-)
G44862 NA non-coding downstream 32039 33056653 ~ 33056863 (-)
G44848 NA non-coding downstream 57647 33028267 ~ 33031255 (-)
G44815 clasrp,LOC102789808 non-coding downstream 150729 32934067 ~ 32938173 (-)
G44803 NA non-coding downstream 235137 32853256 ~ 32853765 (-)
G44777 NA non-coding downstream 330572 32756764 ~ 32758330 (-)
G44872 NA non-coding upstream 3950 33094397 ~ 33095418 (-)
G44936 NA non-coding upstream 252562 33343009 ~ 33348520 (-)
G44940 NA non-coding upstream 325086 33415533 ~ 33416219 (-)
G44941 NA non-coding upstream 325849 33416296 ~ 33422111 (-)
G44995 NA non-coding upstream 498143 33588590 ~ 33590089 (-)
AMCG00013488 NA other downstream 460998 32622153 ~ 32627904 (-)
G44719 NA other downstream 520950 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2346259 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 2602571 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 2606576 30468630 ~ 30482326 (-)
AMCG00013518 NA other upstream 378402 33468849 ~ 33501747 (-)
G45037 NA other upstream 587777 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 602397 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3788746 36879193 ~ 36885493 (-)
G45468 NA other upstream 3868730 36959177 ~ 36959914 (-)

Expression


Co-expression Network