G45930


Basic Information

Item Value
gene id G45930
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38355674 ~ 38357395 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU57242
GTTCCACTGCAAAACATAGAACAGTGCAGTGTACAATAATActgaatacatacaatacatacaagtttatatacattaatatacatggaacacaacatttacaaaacaattctgCATGAATTGGTactctatatatgtatatataatatacggTGTCTTTTACACTGTCTCTACCTCCCCCTgctcacactgtccacacagtcTCTCATCTCTGGGCttccaggtctgcctgtgtcgCCCTGTTTCTATTTCCAGGCTGTGGGCACTGAGTCTGTACTGGCTCAGGGTTTGTCTCTGTTTGGGGTCCTTTACTTTCACCAGGTACGGTGCCAGGCTGTAGTCCCTCTGTAGGGAGGGGTAGCACTGAAGGTGCTGTTGTTCAgtttacacactcacacacgcaaaCAGGTGagcctaaacacacacacacacacgcaaacaggtgagcctaaacacacacacacacacacacNNgcaaacaGGTGagcctaaacacacacacacacacacacacacacacaggtgagcCTAAACACGGACACAAAC

Function

NR:

description
PREDICTED: carboxypeptidase N subunit 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57242 True 546 lncRNA 0.45 2 38355674 38357395

Neighbor

gene id symbol gene type direction distance location
AMCG00013645 NA coding downstream 18466 38330230 ~ 38337208 (-)
AMCG00013644 LOC101476569,LOC102313708,LOC102781775,LOC102216033 coding downstream 38274 38252147 ~ 38317400 (-)
AMCG00013639 NA coding downstream 142220 38199711 ~ 38213454 (-)
AMCG00013637 NA coding downstream 182818 38169742 ~ 38172856 (-)
AMCG00013636 NA coding downstream 187113 38163238 ~ 38168561 (-)
AMCG00013643 hnrl1,LOC106603088 coding upstream 2762 38360157 ~ 38374489 (-)
AMCG00013642 NA coding upstream 21405 38378800 ~ 38381792 (-)
AMCG00013653 ehd2,LOC107670629,LOC107565090 coding upstream 50538 38407933 ~ 38415648 (-)
AMCG00013651 NA coding upstream 60149 38417544 ~ 38434162 (-)
AMCG00013652 bckdha coding upstream 114941 38472336 ~ 38476163 (-)
G45912 NA non-coding downstream 128487 38226185 ~ 38227187 (-)
G45813 NA non-coding downstream 257126 38097989 ~ 38098548 (-)
G45806 NA non-coding downstream 282196 38073088 ~ 38073478 (-)
G45793 slc8a2,LOC105026810,LOC106612604 non-coding downstream 301984 38044173 ~ 38053690 (-)
G45789 NA non-coding downstream 321346 38034030 ~ 38034328 (-)
G45933 NA non-coding upstream 40540 38397935 ~ 38398998 (-)
G45971 NA non-coding upstream 99861 38457256 ~ 38458799 (-)
G46003 NA non-coding upstream 144947 38502342 ~ 38551147 (-)
G46011 NA non-coding upstream 183881 38541276 ~ 38543342 (-)
G46114 NA non-coding upstream 410031 38767426 ~ 38768235 (-)
G45917 NA other downstream 106083 38244821 ~ 38249591 (-)
G45906 NA other downstream 124383 38193034 ~ 38231291 (-)
G45792 slc8a2,LOC103358178,LOC107739881 other downstream 311706 38043736 ~ 38043968 (-)
G45790 NA other downstream 320007 38035310 ~ 38035667 (-)
G45764 NA other downstream 343458 38010098 ~ 38012216 (-)
AMCG00013650 NA other upstream 88451 38445846 ~ 38451347 (-)
AMCG00013661 tmem91,LOC107676753,LOC107757682,LOC107662142,LOC107758240 other upstream 121157 38478552 ~ 38484269 (-)
AMCG00013663 b9d2 other upstream 186455 38543850 ~ 38546035 (-)
AMCG00013669 NA other upstream 231584 38588979 ~ 38591202 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other upstream 340000 38697395 ~ 38701074 (-)

Expression


Co-expression Network