G46144


Basic Information

Item Value
gene id G46144
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38944813 ~ 38945061 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU57528
GTTTTGCTGATCTTAGCATCTTTGCAACATTACAGAAGAATCTTTGGGATAATATTGAAAGCGCTGCCCTTCTCGACATTGGTGCCCTCTgttatttcctttttgtctCTTCCTTCCCATCCTGACCGTCAAGCTATATTATCCAGGCGGGGAAGCGAGCGGGAGGAGACGCGCACCCCTCCCGCATCTCTCCCGCATCTCCCTCAGACACTTCCCGGCAAATGCAGGGGGATGTGATGGTGCTGCAGG

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU57528 True 249 lncRNA 0.52 1 38944813 38945061

Neighbor

gene id symbol gene type direction distance location
AMCG00013690 kcna2b,kcna2,LOC108438074,LOC107673029,LOC104918376 coding downstream 2067 38941253 ~ 38942746 (-)
AMCG00013689 NA coding downstream 59025 38884091 ~ 38885788 (-)
AMCG00013687 NA coding downstream 92859 38845788 ~ 38851954 (-)
AMCG00013686 NA coding downstream 142613 38796395 ~ 38802200 (-)
AMCG00013684 NA coding downstream 174104 38769708 ~ 38770709 (-)
AMCG00013688 LOC107746331,LOC107673019,LOC100330283,LOC101158021,LOC104931868,LOC103360392 coding upstream 27052 38972113 ~ 38973696 (-)
AMCG00013697 LOC106582726,LOC106566040 coding upstream 238927 39183988 ~ 39192405 (-)
AMCG00013696 NA coding upstream 253754 39198815 ~ 39202268 (-)
AMCG00013699 NA coding upstream 288574 39233635 ~ 39254643 (-)
AMCG00013698 NA coding upstream 309782 39254843 ~ 39262647 (-)
G46134 NA non-coding downstream 114081 38826504 ~ 38830732 (-)
G46114 NA non-coding downstream 176578 38767426 ~ 38768235 (-)
G46003 NA non-coding downstream 393666 38502342 ~ 38551147 (-)
G46011 NA non-coding downstream 401471 38541276 ~ 38543342 (-)
G45971 NA non-coding downstream 486014 38457256 ~ 38458799 (-)
G46175 NA non-coding upstream 229494 39174555 ~ 39177975 (-)
G46236 NA non-coding upstream 473430 39418491 ~ 39418739 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding upstream 583886 39528947 ~ 39530228 (-)
G46240 NA non-coding upstream 600510 39545571 ~ 39553245 (-)
G46245 NA non-coding upstream 617036 39562097 ~ 39562296 (-)
AMCG00013685 NA other downstream 161380 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 243739 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 353611 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 398778 38543850 ~ 38546035 (-)
AMCG00013661 tmem91,LOC107676753,LOC107757682,LOC107662142,LOC107758240 other downstream 460544 38478552 ~ 38484269 (-)
G46333 NA other upstream 1328330 40273391 ~ 40275098 (-)
AMCG00013730 NA other upstream 1441000 40386061 ~ 40428625 (-)
G46418 NA other upstream 1641755 40586816 ~ 40587392 (-)
G46423 NA other upstream 1658540 40603601 ~ 40608528 (-)
AMCG00013732 NA other upstream 1673282 40618343 ~ 40637228 (-)

Expression


Co-expression Network