G46333


Basic Information

Item Value
gene id G46333
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 40273391 ~ 40275098 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU57766
taaagtttatttatatataacaacagTACAAAGTGAATCCTTGGCTTGCAAAATAGGTGTGCTTCATATTTACAATAGGTACACAATAATATATTAtcataacaaaaccaaaacccaaataataaaattaaaaaataaaataaaaacaagtacaactTTTCTTAAATACTTTGACTTTCTTACAATTTTCACAACACTtttataaaacaacaagaacagacagccattattattaatattatcaatattaatatgatttgtatttactaTATTACAGAACTCCAGTGTCTACAATGAATGGGTAACTGCAAAAAAAGGTTTGTAGGCTTTTGAATTGCAGGATACTTACAGATTTGggcttgttttgtgtgtttaagaTTTTAAGAGTGAACTCTTGCTTCTTGATttcacaaaataacacaatggAAAACAGCCATTGTGGTACACAATATTATTGTCATATGCCTCTCGGCAAGAAAACTGCCCCCCGGGACAACCTAAAACCCAAAATAGGAAAGTGCATGAAATATGTCAATTTTATGTTAATGACATACTTTTTGAGattctaaatatattgtattccaACTGACTTTAAATAAGCTGTCTGATTAAAATTAGAAGTAAAATGTATTGGACTGGTACTGCAGAATGACACACAccttgattttaaaaacattgtttcttttgtttttgtatggaAAGTGACAGGCGCAATGACATTTTGCAGAGGGGGATAAACAACTCTACAACATCAAATTCTGCATGAACCAAGTATTCGTTTGTACTGATTGAACTCTCCTGAAGGTACAGTAATGCAGATCAGGGTGATTTAGCACTtcagctgaaataaaaacacaaaatagatgATTTCTGTGCTAAAGTAACACCGGGAGGAAACACAATGCTTGTCCACAGGACACAGGCCATTGTGCTCCAAGGATCACATCTATGTTTGAAATGAATACAGCAAACGacccaaaaaattaaataaaaatgttaagaaatcATGCAACATTTTCATGGAACGTATAAATGGTATAACTATTAAAGACATTACCCTGAATTAGAAATGCCTTGAATGTTCAGCGGATTATTTGGAGACCAAGACTTCCAGATTGTTTTTACATCAAGTAGTTAAAACGCACCCTGTCAGCTCTGTTTTATTCATTCCACAATGCTCAGTGTCTATTGGTTTAACAATGAGAAATATACAGCACCATTATCACAAGATGGTTTTAAAATCCTAGTGAAGGAAATCTGCAATGTTGAAAACCTGAACTTGTCTTTGCTTTGACCAGACGTACAGAAAACGGAAAAGCGTAAAACCAACACATCTTATGACCGGATTTCACGGGAGATTGATTCACACCAGCGACGGCGCCCCAGCACCGTGAGTGAGGTACGAATGGGTTGTCACATGCTCTTTCATCAATGGGTGGGTGTACCATTACAGGCCGAGACAAGGGGGTAAGTTCCTCACCAATGAGGCAGAAATCAAAAGGcagggaagagggagaggtCAGCTGTCTCAGTGGGTTCAGTGACACTCCCACAGCGTTCTCCCTGTCAGAGCGGCAGAAGTGCTGGGGGGCTGCAGAGGGTCTCTCTCCTCAGTCCAGTgatcagtccagtccagtgatGGGACTCGCTGTGCCGGAGCTTCTGCAGGTGTACAGACTAATCATGTCAAGCGCCACAGTCGTGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57766 True 1708 TUCP 0.38 1 40273391 40275098

Neighbor

gene id symbol gene type direction distance location
AMCG00013723 NA coding downstream 367723 39900104 ~ 39905668 (-)
AMCG00013722 NA coding downstream 376929 39876427 ~ 39896462 (-)
AMCG00013716 NA coding downstream 417071 39855358 ~ 39856320 (-)
AMCG00013718 NA coding downstream 435083 39837346 ~ 39838308 (-)
AMCG00013715 NA coding downstream 438635 39761339 ~ 39834756 (-)
AMCG00013733 NA coding upstream 365978 40641076 ~ 40647148 (-)
AMCG00013737 NA coding upstream 609856 40884954 ~ 40888451 (-)
AMCG00013738 NA coding upstream 614631 40889729 ~ 40927189 (-)
AMCG00013742 NA coding upstream 717691 40992789 ~ 40995408 (-)
AMCG00013747 NA coding upstream 927966 41203064 ~ 41222134 (-)
G46263 NA non-coding downstream 646201 39622363 ~ 39627190 (-)
G46245 NA non-coding downstream 711095 39562097 ~ 39562296 (-)
G46240 NA non-coding downstream 720146 39545571 ~ 39553245 (-)
G46238 LOC103022582,LOC106572854,LOC105023759,LOC105934746,LOC105912002 non-coding downstream 743163 39528947 ~ 39530228 (-)
G46236 NA non-coding downstream 854652 39418491 ~ 39418739 (-)
G46368 NA non-coding upstream 106452 40381550 ~ 40381998 (-)
G46370 NA non-coding upstream 110251 40385349 ~ 40385758 (-)
G46372 NA non-coding upstream 141577 40416675 ~ 40418642 (-)
G46395 NA non-coding upstream 167212 40442310 ~ 40446394 (-)
G46419 NA non-coding upstream 318050 40593148 ~ 40593420 (-)
AMCG00013691 NA other downstream 1301812 38942775 ~ 38971579 (-)
AMCG00013685 NA other downstream 1489958 38782024 ~ 38783433 (-)
AMCG00013677 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107572204,LOC105896821,LOC107388308 other downstream 1572317 38697395 ~ 38701074 (-)
AMCG00013669 NA other downstream 1682189 38588979 ~ 38591202 (-)
AMCG00013663 b9d2 other downstream 1727356 38543850 ~ 38546035 (-)
AMCG00013730 NA other upstream 110963 40386061 ~ 40428625 (-)
G46418 NA other upstream 311718 40586816 ~ 40587392 (-)
G46423 NA other upstream 328503 40603601 ~ 40608528 (-)
AMCG00013732 NA other upstream 343245 40618343 ~ 40637228 (-)
AMCG00013773 NA other upstream 2153679 42428777 ~ 42455758 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G15288 NA non-coding CI01000001 null 4240551 ~ 4273985 (+)
eurasian perch (Perca fluviatilis) G12850 NA non-coding NC_053112.1 CM020909.1 48339192 ~ 48339516 (+)
eurasian perch (Perca fluviatilis) G48680 NA non-coding NC_053116.1 CM020913.1 10907360 ~ 10960482 (+)