G46423


Basic Information

Item Value
gene id G46423
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 40603601 ~ 40608528 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU57875
tcattaaaactttattttattttttttacagtgcatgAACAGAATGCCATGACCAGAAGTTAAATTTTCTgtattctgcttttaaaatgttttctgttaattacttaaaaaaataatggaacGATTTACAGATCTCTTATTTTTCTGAATGAGAATTCTGGAAGTATTTATAAAGGtgctgtacaatatataaacatttacaactACCACATAATGTAGAGACCAAAAGGCTTCTTTGTCAAAGCAATGCAAGGCcacattattatatacagaCACTGAGATGGGAACTGGGAAGCAGGGAGAGGAGGGCATACAAGACAATACCAGTGCAGGAGACATCGAGGTGATTTCTCAAGATCGTCCCAAAGAAGGAAACTTTCCTTCTCTGCGGCAGACTGGAGCACAAAAGAATATCCGTTTGACATGGTCATCTGATCAATGTTGAGGGATGGGGTTAGACTTTATGTTCAGGTCTGTGGTAAGGCTTAGAGTCAGGAGAAGTTTTAGGTTTAGATCAGGGGTTTttaaaccggtcctggagtaccccctgGTTTAGATCAAACCCAGGTCCTGGAGGgccagtgtcttctgttttgtgTTCCAACTCGACTTCTCTTACTTAGCTAGTTATTTTATCTATTAGACATGTATAACCAGAGGCtcacaaaaaaaagtctgtggTTTCCTACATGCTTGCATTCAGAGATCTACatgaacatgaaaaataaactatgaatCTGTTGATTATTACACATCTGAAATGACACAGGAAGTGGTTTTCCATTCTGCcagtttttcatttgatttgtcCCAGGTCCTCTCTAACTACTTTGTAAGTGACTAATTGCACACTGAACTGTCAGTGTGGTTtgcattttcacattgtttatGTGCATGCATTCCTGCTTACCACTTATTTAAACACCTTATACTGCATTGCAGTCTGTTACAGTTGATTacttaaaatgatttttaaaaattctaGATACTCAAACTAACTTAATATGCAGCCTGTAGAGATGCATTTAATTCATCCAGTAAATCAGCTAATTGGATCAATTAAGTAACTAGAAACTGGAACCAAAGCCAGAAGATACTGCGGCCCTCCAGAAATGACTTTGAGAGGGTTGAGATGTTGATGTGGATGGCAGGAGTTGTGGCCAGATGTCCCGAGAGACAATATTTCATGGATATTCCATTCTGCGGTTTGCACTTCCTGAAAAATAGTCAGCTGGTTTCCTCATAAAGCAGATTTTAGTTCAGTTTTAGTCGATGGAGGGAATTGACCAACATTggcaattatacaaaaatatttaaggGACTTCTTTGTTTAACCGCTTTGATATTTCCACTTTAGTTTTACATGTGGAAGGTTCACAGTACTTGAACTAAACTGCTGTACCATCAATGGCaacagaaacatacatacatagcaCACCACGTAGTCTTGGGTTTCACATAGCTCTTATTTtagcacatttctttcttttatattttgcaaCACTTTGGGAgtagaataatttaattaagcaCTGACTGTGTCAATAAATTCCATTAGGAACCAAGggtaattaatattattcactTGGATGTCATCCTGCACCTTGAAATGTTAAGTCATGCGCTAGTGAGCCAAATTCATTTTCACCCAAATGTTGTTTAGGAAATACACTGCTAAatgatacacacatttaataaaataccatCCAAGCTACtgaatttctaaaaaaaaaaacacatttctgtttgctTGTAGGATACACATTTGTTTGAGGACCTAAGACAGTTTGTTACAGCAAACACCATAAAAGGATGAAGAAGTGACTGTTGGAGCACTATATATATCGCACTGCGGAATGGCTCagtatgaatacatatttatttatatttatctcaATAAGTTAGATATGCTTTTTCATATACATAGTAAACAATATACTTAAACACAAGTTTCTGGTCTGTTAAAGAGATATCAAgcctatatgttttttttagattctAGTCAAAACGACTCACAAAGCTAAGGAATGAGTTTGGATACTGATTTTCAGATATGTACACGATTGGAAATCCTGGGGATTTGAGACGGACACAGCAGGTGGGACCTTGGAGTCAAAGGTACGCAAGCAAAAACACGGGAAGAACAATATACGCATGCAGTAAAACAAATCCTTCATAAAGTACAATTTTGAAAGCATAACGTGTACATGTCTGTACACAAGATGGCAGACCTTCGAGATGTATACCATCCTTCATTTGGTAGATATGTCTTTCTAATTCATTGCATATGGAACAGTTCAGTGAAATTAAAGGTAAGCAGGTACAGTTTTGCATTATTTGGTTTCCTTTCAGAATCCCCTATTGGCACATATCAGGACTGTTTGGAGTTGTTGGCTTTACAGGTTTCACAAATATCAACGCAGCCTTAATTTCATTCAACATAAAAGCTTCTACGCATATAAGTAAGGCAGACGAACAAGGAGAACACAGATGCTACAGTATGTTGATGTGGGGAAGGGAAACAAGTAttcaaaatcaatataaatccCTTAAATCAGTAATATAGAACAAAAAAGCCCCCTTTGTCCCATTTGTGCAGTGACACATCCAAAGACACCTCAGAGAAGTGAAATATCCAGTGTGTGTTGTCCTCACTATTCCAGACTCTTTGGCTCAGGTAGTCTCTCAGTTCGTGGCTGGATTTTGTCAGAGCTGGGCACCTTCCACGGCCCCGGTGTGATGGGGGCTTTCCTGACGCTATTTGGGATGCCATTGCCAGAGCCTTCTATAGCCGCAGCAGGaatcctgttatctttctcgTGCTGCTCATCCGTGACTTTCCCCTTTGCCTGACCGACTGCTCTGTCCTTCTCTTTATCTCTGCGTCCTGCGTCCTCCGgctctttctgtgtcttgtcCTTCCCTGCGTGGGAGCGAGACCGTGGCACTTTGGAGTCTCTGTCCGCGTCCTCTCGGTTGTCTGTTCCCCGGCGCTCGGTGGAGTTCCTTGCCGACTCCTCTGCACTTTTCCCCGACTCTTTCTCTGCCGGTCCGCCTTCTCTGTGTCTGGGCTGCTCCTCCCTgcgtttcctgtctctgttATCGGCAGGCTggttgtgtttgtctgtcttcaCCTGGCTGACCCTGTGTTGCTCCTTAGTGACCGGATCTTGTTCCTTTTTGGGAGACTTCTTTGGGCTTAAGGACCTCTGCCTTCCCTCTTTTGGATGGCGGGATTTCTTGTCCTTGCTTCTGGTGTCAACTGGACTGACGGACCGGTTTCTGCCGCTGGGAGGAGTGTTCCTCTCCATCTTTCTTGGGCTACGCGATCTGTCTTTAGTGTCTGCTTTTGCACTGCTGGTTTTCTTTGGGTTGGCAGACCTGGCCTTGGGAGAAGCCTCAAGCTCACCCTTCTTACCAAGCAGAGCTCCAGGACTGGTGGATCGGTCTCGTTTCGGTGCCGTGGCTTTGCTGGCCGGGTCTCTGGAAGGGTTCTGGCCTATCCTGTCACTATCCGCAGGACTGGCCGTCCCACTGGCTCGGGGCGGAAGCGATCCAGAGGGCAGGGAGGTGGCGTCCCAGTGGTGGGGGTCCTCTCTTCTCACAGCGGTGGGGGAGGAATCCAAGATGGAGGTGGAGTTAAACGATGACCACGGTGAGAGCGGCTCTTCAGAAGCTGAAACCTCATTCTGAAAGCTGGTGGGTGAAACATTCATTTTATCCATTTTA

Function

NR:

description
PREDICTED: protein transport protein Sec23A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57875 True 3729 TUCP 0.42 3 40603601 40608528

Neighbor

gene id symbol gene type direction distance location
AMCG00013723 NA coding downstream 697933 39900104 ~ 39905668 (-)
AMCG00013722 NA coding downstream 707139 39876427 ~ 39896462 (-)
AMCG00013716 NA coding downstream 747281 39855358 ~ 39856320 (-)
AMCG00013718 NA coding downstream 765293 39837346 ~ 39838308 (-)
AMCG00013715 NA coding downstream 768845 39761339 ~ 39834756 (-)
AMCG00013733 NA coding upstream 32548 40641076 ~ 40647148 (-)
AMCG00013737 NA coding upstream 276426 40884954 ~ 40888451 (-)
AMCG00013738 NA coding upstream 281201 40889729 ~ 40927189 (-)
AMCG00013742 NA coding upstream 384261 40992789 ~ 40995408 (-)
AMCG00013747 NA coding upstream 594536 41203064 ~ 41222134 (-)
G46421 NA non-coding downstream 2069 40601198 ~ 40601532 (-)
G46420 NA non-coding downstream 5703 40597358 ~ 40597898 (-)
G46419 NA non-coding downstream 10181 40593148 ~ 40593420 (-)
G46395 NA non-coding downstream 157207 40442310 ~ 40446394 (-)
G46372 NA non-coding downstream 184959 40416675 ~ 40418642 (-)
G46458 NA non-coding upstream 374604 40983132 ~ 40983557 (-)
G46459 NA non-coding upstream 375105 40983633 ~ 40986274 (-)
G46476 NA non-coding upstream 444620 41053148 ~ 41061824 (-)
G46484 NA non-coding upstream 491175 41099703 ~ 41103966 (-)
G46491 NA non-coding upstream 563197 41171725 ~ 41174790 (-)
G46418 NA other downstream 16209 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 174976 40386061 ~ 40428625 (-)
G46333 NA other downstream 328503 40273391 ~ 40275098 (-)
AMCG00013691 NA other downstream 1632022 38942775 ~ 38971579 (-)
AMCG00013685 NA other downstream 1820168 38782024 ~ 38783433 (-)
AMCG00013732 NA other upstream 9815 40618343 ~ 40637228 (-)
AMCG00013773 NA other upstream 1820249 42428777 ~ 42455758 (-)
G46742 NA other upstream 2090978 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 3000754 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 4730331 45338859 ~ 45344015 (-)

Expression


Co-expression Network