G48506


Basic Information

Item Value
gene id G48506
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49719765 ~ 49721526 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60601
TCTGAGCCACCAACCCCTCACCTGCTCTTCCAGGCTTTACATTTGCAAGGTGACAAAACAAGGAAGATAAGCAGAGTGAGACCTAGTAACAACAGGCCAGAGATCCATTAGAAAACAATGTTGATTCTCAGAgttacacccccccacccctttaaccattttaaaaaaacaatcaaaacagaaGTCTCTATATTACAAGGCTCCAGACACAGACAGGATCAGAGTGAGACTCACCCCCTGGTCAGGGACAGGGCCCTGCCGCATTGGCTGGGGCTTGAGGGACACACAGGGCCCTGTTCATGGAGCTGCCCTCACCCCAATACAGCACATTGCTCTGTgggacagcagtgtgtgtgtgtgtagaggggAGGGGTCCCGGTCAGTCTATTCCAATACTGCAGTCGAGAGAAGAGTTTCTATGAACTCATTTTACACATGATCGGGTCATGAAAATATAACCAGGAGACACGGCTGTCTGGGGAATTTCCCAGACTGCATTAGTCCACACCGGCCTCAGTTGCCTTACTGCCCCTCTCAGTCAGAGTCACGGTGTCACATGGGTGGACGGGCGAGAGGACCCAGGGTGCTGCAACACGATTGGTCTGTTGGCAGGAGCCGTTTTCCTCCAGGAGAGGGCACGAGTGAGACAATAAGAAAAGGCACCAAGTAAGATCTCTCTCTCGTCTGCCCACCATCCAGGGAGGTCTGAGCAGAGTGCTTTGGGCCTTCAGAGAGCAGGGGAGTAAAACAGTACTTATTGGGGCCCAGCAGGTCACTGACACCCAGTGGGGTTAATGCTACCAATTAAAACAGCTTTAGGTTTCCTTCCATACTGATTGAACATTCTCTGCCCAGGACAGAGCAGTGAAGTTGTCAGGCTGCACAGAGCTTTAGGGGCTGGCTGGTCACCAGGGCTCCAGGCCCCCCACAGCGTCTCGGAGCCACCCCTGACTGGACACGGGCTGAACCACTGCAGGCCAGCGCAGGGGGTATTAAGACAGGGTTATGACCTTGTGCCGGGTGCTGCAGCGCAGGGCGTGTATAGAGCTCTCTGGCCTCAACAAAACAGTCATCAGGACGTGTTCGAGAGGACAAACTAATACAGAGGGTAAATGAATGAGAGTGTGACGGAGGGTTTCAGTGCTAGGACAGACAGCTGCGCACAGCCGAgagtcggggggggggggcagcgcCGAGCGTGAGAGCGGAGGTCTGGAGCAACTGGGAGAGCAGCACAGGACGGGGGCTGTAGCAGCCTGGCCTTCAGCACTCTGCTGGTTTGGTTTTGTGTCGGTGTTGGATGAGGCTCCATTTTAACCTCCGTCCAGACAGCATCAACATGCCCCGTAAACACCACGCCCCAGAGgaaaacagcacagcagagtAGAGAACACAGTAGAAATGTGTCACGTTCCTGAATCATACGTCTGTCACAGTGCCTCGCGTGAACACCTAACCCACACCCTTCCCCCAAAACCCCCAGAGTGCCTCCCAGCACCCCCCACCGTGTCAGTCAGCTCCTGTGGCTCCTGTGCAGCCACTTCCCTGCCCTGCAGAGACGGCAGtcactgggctgggctgggctgttgGGTGCTGGTCAGGCCACGCTGGCCTCCGCAGATCGCTGAGTGTAGAACAGTATGTAGGCCTGAGTGTTGCACACCTCCTCCACGCTGCAGACGTTCATCTTGGAGTCGTTACAGTGAACCCAGAAACCTGGGGATGAGACGGCAAGATCAG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU60601 True 1740 TUCP 0.55 2 49719765 49721526

Neighbor

gene id symbol gene type direction distance location
AMCG00014035 NA coding downstream 16392 49697861 ~ 49703373 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding downstream 25601 49689679 ~ 49694164 (-)
AMCG00014024 NA coding downstream 39403 49678320 ~ 49680362 (-)
AMCG00014023 NA coding downstream 112571 49595783 ~ 49607194 (-)
AMCG00014012 NA coding downstream 161005 49557804 ~ 49558760 (-)
AMCG00014036 NA coding upstream 28942 49750468 ~ 49757241 (-)
AMCG00014046 NA coding upstream 61746 49783272 ~ 49788746 (-)
AMCG00014048 NA coding upstream 69817 49791343 ~ 49794766 (-)
AMCG00014047 NA coding upstream 75320 49796846 ~ 49804601 (-)
AMCG00014045 NA coding upstream 92523 49814049 ~ 49818276 (-)
G48494 NA non-coding downstream 44015 49663092 ~ 49675750 (-)
G48439 sars,LOC107697960,LOC107671868,LOC107706967 non-coding downstream 91998 49623810 ~ 49627767 (-)
G48437 NA non-coding downstream 96574 49622097 ~ 49623191 (-)
G48433 NA non-coding downstream 100810 49618277 ~ 49618955 (-)
G48430 NA non-coding downstream 105791 49613696 ~ 49613974 (-)
G48508 NA non-coding upstream 4209 49725735 ~ 49726249 (-)
G48509 NA non-coding upstream 4762 49726288 ~ 49727007 (-)
G48512 NA non-coding upstream 12383 49733909 ~ 49734172 (-)
G48517 NA non-coding upstream 27063 49748589 ~ 49749282 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other downstream 221135 49494727 ~ 49498630 (-)
G48373 NA other downstream 234998 49484500 ~ 49484767 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 898609 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 1240188 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 1344669 48366043 ~ 48375096 (-)
AMCG00014033 NA other upstream 220 49721746 ~ 49724237 (-)
G48510 NA other upstream 6978 49728504 ~ 49729055 (-)
G48516 NA other upstream 23420 49744946 ~ 49747551 (-)
AMCG00014043 tmcc2 other upstream 142796 49864322 ~ 49930152 (-)
G48570 tmcc2,LOC106583086,LOC106565656 other upstream 149467 49870993 ~ 49918397 (-)

Expression


Co-expression Network