G48552


Basic Information

Item Value
gene id G48552
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49857480 ~ 49857687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60664
GCACGCCGACTCGACCAAAACGCAAAAATAAAacgacaaatacaaatatgtgtgtgttgaagTGAAGTGATGAAATGCACTGGATTCCTGAGGATCAGTGCAGAGGCAGGGAACAGCCACAGCTGCATGTTAATAGGGCTCCTGAAATGCCTTTGTCAGCCCAAAGCCCCGGCTAACGCAGCCACAATGGCACACATACAGCTTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60664 True 208 lncRNA 0.49 1 49857480 49857687

Neighbor

gene id symbol gene type direction distance location
AMCG00014040 NA coding upstream 15165 49837425 ~ 49842315 (+)
AMCG00014031 NA coding upstream 84696 49772161 ~ 49772784 (+)
AMCG00014037 NA coding upstream 85586 49770593 ~ 49771894 (+)
AMCG00014030 NA coding upstream 119321 49736414 ~ 49738159 (+)
AMCG00014029 usp49,LOC106583088 coding upstream 128488 49717514 ~ 49728992 (+)
AMCG00014050 NA coding downstream 52871 49910558 ~ 49916242 (+)
AMCG00014039 NA coding downstream 60940 49918627 ~ 49925703 (+)
AMCG00014049 NA coding downstream 69539 49927226 ~ 49929020 (+)
G48479 NA non-coding upstream 63830 49793206 ~ 49793650 (+)
G48467 NA non-coding upstream 103453 49753584 ~ 49754027 (+)
G48460 NA non-coding upstream 125680 49729671 ~ 49731800 (+)
G48449 NA non-coding upstream 177604 49679497 ~ 49679876 (+)
G48372 NA non-coding upstream 372521 49484489 ~ 49484959 (+)
G48560 tmcc2,LOC106565656 non-coding downstream 13419 49871106 ~ 49873377 (+)
AMCG00014038 NA other upstream 43495 49808148 ~ 49813985 (+)
AMCG00014028 NA other upstream 108311 49739312 ~ 49749169 (+)
G48464 NA other upstream 114966 49741852 ~ 49742514 (+)
G48457 NA other upstream 133604 49723026 ~ 49723876 (+)
AMCG00014032 usp49 other upstream 140052 49706843 ~ 49717428 (+)
G48566 NA other downstream 56242 49913929 ~ 49914542 (+)
G48578 NA other downstream 79128 49936815 ~ 49948082 (+)
G48583 NA other downstream 98505 49956192 ~ 49956729 (+)

Expression


Co-expression Network