AMCG00014104 (cyyr1,LOC107751099)


Basic Information

Item Value
gene id AMCG00014104
gene name cyyr1,LOC107751099
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1835432 ~ 1838125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014104
ATGGACGGAGTCGGGACCGGACGCGCACTGCCCTCCCTGCGGCTGCTGCGGGACTCGCTGCTGCTGTGCCTGCTGGCCGCTGGAgcctctctgtccctgtgtgtctcgCAGTGGCAGAGCACCGGCAGTCTGGTGTGGACCACCCAccaagagagagggggagtgggggtgggctgtgtgaaacacacacagagcagcgtAGAGCCGCGGCAAAGGCCACGCCGTCTCCTGCTTGACCTCAAgggCACAGCGATCGCAGGGATCGTGTTCGGTGTGGTGTTCCTGATGGGCGCCGTGGCCGGCGTGTTCCTGTGcatctgcatgtgtgtgaagaGCGGCCGCGGCGCCCGTGTGGGCGTGTTCAGAGCCACGCACCTCAACACCATCACTCAGGGATACCCAGGtgagccccccacccccgctgTAGTAACAGCCTGA
>TU84663
caacaacaacccgcGGACGTGCTGGTCGTGCCGGGCGGCCGGGCTGGGGGTCGTGACGGCGGGGGCGGCGCAGGACGGTCATTGAGAAAGTGCGGCTCCTCGAGTCAGCgctggaggaggagcagagcaggaggaggagaagaggaggagaggaggagggctGGAAAGAGTGAGAGACAAAGAGCAGGACGACGGGCGCTACACGTGGGGCGGCCAGTCTGAGGCGCTCCGGACAGCAGCTCCGTGTCTCTGCTCTCGGCAGCACCTTTGCGTCGCTTTCCTGCGCTGTGTCCAGCCCGGACGGAGATGCTTCCAGGCGGCTGCTGAGGCTCGGACCCGGGGCCGGGTGCTGTGAGAAGAGTTTGCCAGTCGTGGTCGCCGGAGAGCCGGGGGTCCAGATGGACGGAGTCGGGACCGGACGCGCACTGCCCTCCCTGCGGCTGCTGCGGGACTCGCTGCTGCTGTGCCTGCTGGCCGGCCGCGGGGGTGCTGAGTGCTCGGGCTGTGTGGAGTACTGCTGTGACGGCTCTCCGCCCTTCTGCTGCTCCTACTACGCCTACGTGGGGGATGTGCTCTCgggCACAGCGATCGCAGGGATCGTGTTCGGTGTGGTGTTCCTGATGGGCGCCGTGGCCGGCGTGTTCCTGTGcatctgcatgtgtgtgaagaGCGGCCGCGGCGCCCGTGTGGGCGTGTTCAGAGCCACGCACCTCAACACCATCACTCAGGGATACCCAGGtgagccccccacccccgctgTAGTAACAGCCTGAGGCAGTCACTGGTCCCGAACACAGtgcagtccagcagggtctcggccctggtcctgagagagaCAGTCCAGTCCAATAGTATAAATACCTAAATAATGTTTTCCTTAGTGTTCAGAGG

Function

symbol description
cyyr1 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including female organism; head; lateral line system; male organism; and pectoral fin. Orthologous to human CYYR1 (cysteine and tyrosine rich 1).

NR:

description
PREDICTED: cysteine and tyrosine-rich protein 1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014104 False 438 mRNA 0.66 3 1835830 1838007
TU84663 True 891 TUCP 0.65 3 1835432 1838125

Neighbor

gene id symbol gene type direction distance location
AMCG00014101 NA coding upstream 2072 1825855 ~ 1833360 (+)
AMCG00014100 NA coding upstream 22134 1799682 ~ 1813298 (+)
AMCG00014095 NA coding upstream 270858 1545327 ~ 1564574 (+)
AMCG00014096 NA coding upstream 290207 1541410 ~ 1545225 (+)
AMCG00014089 NA coding upstream 401824 1412350 ~ 1433608 (+)
AMCG00014102 app coding downstream 20553 1858678 ~ 1869442 (+)
AMCG00014103 NA coding downstream 34624 1872749 ~ 1878960 (+)
AMCG00014106 NA coding downstream 83214 1921339 ~ 1925062 (+)
AMCG00014112 NA coding downstream 170477 2008602 ~ 2022266 (+)
AMCG00014113 NA coding downstream 186473 2024598 ~ 2028511 (+)
G67792 NA non-coding upstream 13674 1820573 ~ 1821758 (+)
G67699 NA non-coding upstream 559216 1275991 ~ 1276216 (+)
G67698 NA non-coding upstream 585118 1250099 ~ 1250314 (+)
G67690 NA non-coding upstream 812619 981839 ~ 1022813 (+)
G67685 NA non-coding upstream 1030686 804537 ~ 804746 (+)
G67789 NA non-coding downstream 2040 1840165 ~ 1842445 (+)
G67882 NA non-coding downstream 239178 2077303 ~ 2077602 (+)
G67899 NA non-coding downstream 310324 2148449 ~ 2148654 (+)
G67907 NA non-coding downstream 495366 2333491 ~ 2333944 (+)
G67908 NA non-coding downstream 512004 2350129 ~ 2373305 (+)
AMCG00014099 NA other upstream 337828 1479919 ~ 1497604 (+)
AMCG00014061 NA other upstream 1588430 136864 ~ 247002 (+)
G67577 NA other upstream 1728310 58449 ~ 107122 (+)
G67801 NA other downstream 40966 1879091 ~ 1881041 (+)
AMCG00014111 NA other downstream 62095 1900220 ~ 1902687 (+)
G67896 NA other downstream 288747 2126872 ~ 2130145 (+)
AMCG00014146 NA other downstream 868715 2706840 ~ 2710329 (+)
AMCG00014196 NA other downstream 2289351 4127476 ~ 4131718 (+)

Expression


Co-expression Network