AMCG00014112


Basic Information

Item Value
gene id AMCG00014112
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2008602 ~ 2022266 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014112
GACCCGGCCCCCGGACGCCGCttcacccccccctccaccacgCTCAGCCCGGGCAAGATGAGTGACGCGCTGCCGCTGGGGGGACAGGACAGCAGCGCTGCCCTGGTGGGGAAGCTGCGCATGGCGGACCGCAGCATGGTGGAGGTGCTGGCGGACCACCCGGGAGAGCTGGTCCGCACCGACAGCCCCAACTTCCTCTGCTCCGTCCTGCCCACCCACTGGAGGTGCAACAAGACCCTGCCCATCGCCTTCAAGGTTGTTGCACTGGGAGACGTGCCCGACGGCACACTGGTGACAGTGATGGCGGGGAATGATGAGAATTACTCGGCGGAGCTGCGCAACGCCACGGCCTCCATCAAGAACCAGGTGGCGCGCTTCAACGACCTGCGCTTTGTGGGCCGCAGTGGGAGAGGCAAGAGCTTCACCCTGACCATCACCGTGTTCACCAACCCGCCGCAGGTCGCCACCTACCACCGCGCCATCAAGATCACCGTGGACGGACCGCGTGAGCCCCGCCGGCACCGCCAGAAGCTGGAGGAGCCGGTGAAGCCGGGCAGCCTGGCGTTCTCAGAGCGCCTCAGTGAGCTGGAGCAGCTGCGCCGCACCGCCATGAGGGTCAGCCCTCACCACCCCAGCGCCACAGTCAACCCCCGGCCCCCACTCAACCACGCCGCCCCCTTCTCCAGccccacacacagccagctcTCGGactccAGGCAGATGCAGACGTCCCCCTCCTGGGCCTATGAGCAGTCCTACCCTTACCTGGGCCAGATCTCCACCCCCTCCGTCCACACGGCCATGCCCATCTCCCCCGGCCGGGCGGGGGGCATGTCCACGCTCTCTGACCTCTCCAGCCGTCTCTCTGGCCCTGACCTGACGGCCTTCAACGACCCCCGGGTCGGGCTAGAGCGCCAGTTCTCCTCGCTGCCGGACGGCCGCTTCTCGGACCCGCGCGTGCACTACCCCGGCCCCTTCACCTACACGCCCACACCCGTCACCACGGCCATCGGCATCGGCATGTCAGCCATGACGGGCACCGCACGCTACCACACCTACCTGCCCCCGCCATACCCCGGGGGCTCCTCGCAGGGCCAGACGGCCACGGCCTTCCAGCCCGGCTCACCGCCCTACCACCTGTACTACAGCACGGCAGCCGGCTCCTACCAGTTCTCCATGATGTCCGGCGGGGACCGCTCGCCCCCCCGCATCCTGCCGCCCTGCACCAACGCCTCCACCGGCTCTGCCCTGCTGAACCCCTCGCTGCCCAATCAGAGCGAGGGGGTGGAGACTGAGGGCAGCCACAGCAGCTCCCCTACCAACATGGCCGCCGGAGCTGGTCGCCTGGAGGAGGCGGTCTGGCGGCCATATTGAGCACTGTGCCGGCGCCCTCACAGACAGCCCTGCGGTGCCAGCGCACCCCCACTCTGAGCTTATTCTTTTTGTATCAAGAAGGATTGTCCACAGAGAACACTGGTCCCCTGGGGCACGGGGGGACATGCCAGGGGGCAACGGGCGacttctctgtttctctcaaAGTTACtgctattttttataattaattattgctgttattattgttgttgttgttgttgttattattattattgctattaattATTATGACCCCCCTCCTTTTTCAAAATAAGAAGAGACATAAACTGTGAAGGGTTTCTGATTGGCAGACTGTGAAGACGCTTGTTTCGTAGGAAGAAGGTTGCTTTCATTCCGGGGGCTTCACAGATCCTGACGCTGCTCCCGGGGGTCTGGCGCTCTGGGGGGCTGAAGGCGTCCGCGGCACTTTGTGGTGGTCTGTCTGTGTAGTCCCGACTTCCAGTTGACTCACTAGTGCGGGAAACTAAGAGCGAGGGGAAGGCAGTCCTGCGTGTGAGGCTGGGGGAGAGGGACGGGGCTCCCGGAGGCAGGCTGTGCCGGACGCACCACACTGCAGCGCTCTGTTTGTATCCGTGGCTGTAAACACATCCATCTTCACCAAAACAACGCCTAATCCACAGCCAAAACACATCTTTTGTTCAGCTGTTGTGGTTCTGCCGCCACCTCGGGCCCCGTTCTGGAGCCCATCTGGTGTAATGCGAGCCGGTTTGCTCTGTGCCGGGCGTTCCTTTGTGCCGCCGTGGCTGTGTGTGACGCTCTGTGTCCTAGGTAACGCAGCCTGGCTCGGGCAAGGGGTGTCGCTCGCTGCAGGGCCACAGTGTTGACAGGGCCGAGCCCAGAGTCTGTGTTTGTACAACAAACACGCAGCGTCACCGACTCTGACCCCGCAGTCCCGAGCTGTGTAAGTCTCCGGCTGTCAGAGCCCGGCACACTGAGCTCCGGCCGCTGCCAGCTGCGTGAACCGAAGAacgaattaaacaaatacaaaataagtaattcaaATGGAGACAGACCAAAAAAGCTGGACacatcagcagagagagagagagagagagagaatatttaATAGCTAAACtgattgttgctgttttgttgcTCTCATCTCTGCGTAGGCCTGGAGCAGCGACCAGCACTGCAGGACGGCCGAGCGCACACCGAGGGCCCGGAGTGCAGCGCTGGGGCCAGGGTTAGAGTCAGGGTCAGGGTGAGGGCCGGGGTGTAACTTCAGTTATGGTacagggtgggggtggggttggcCCCTGTGCCACAAGACACAAGCTCTTTCACCCCGTCTCCCCCGTGACTGATGCTGCCGGAGAATCCACCTCTGAGCTCAGTTTAAATCTCCCTCGGGTCACATGACTGACGGCCTCAGCGACGCTCCATCCCCACGTTGTGCTCCGATCGCTGTCGGAagttctatttttgttttgtttttttactgtattttatttgtcggtgttaatgttgta

Function

GO:

id name namespace
GO:0030099 myeloid cell differentiation biological_process
GO:0010628 positive regulation of gene expression biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0060216 definitive hemopoiesis biological_process
GO:0001568 blood vessel development biological_process
GO:0035162 embryonic hemopoiesis biological_process
GO:0007399 nervous system development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K08367 RUNX1, AML1; runt-related transcription factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014112 True 2867 mRNA 0.61 6 2008602 2022266

Neighbor

gene id symbol gene type direction distance location
AMCG00014106 NA coding upstream 83540 1921339 ~ 1925062 (+)
AMCG00014103 NA coding upstream 129642 1872749 ~ 1878960 (+)
AMCG00014102 app coding upstream 139160 1858678 ~ 1869442 (+)
AMCG00014101 NA coding upstream 175242 1825855 ~ 1833360 (+)
AMCG00014100 NA coding upstream 195304 1799682 ~ 1813298 (+)
AMCG00014113 NA coding downstream 2332 2024598 ~ 2028511 (+)
AMCG00014120 NA coding downstream 61160 2083426 ~ 2113366 (+)
AMCG00014124 NA coding downstream 139491 2161757 ~ 2172540 (+)
AMCG00014122 NA coding downstream 157380 2179646 ~ 2195573 (+)
AMCG00014123 NA coding downstream 199349 2221615 ~ 2222904 (+)
G67789 NA non-coding upstream 166157 1840165 ~ 1842445 (+)
G67792 NA non-coding upstream 186844 1820573 ~ 1821758 (+)
G67699 NA non-coding upstream 732386 1275991 ~ 1276216 (+)
G67698 NA non-coding upstream 758288 1250099 ~ 1250314 (+)
G67690 NA non-coding upstream 985789 981839 ~ 1022813 (+)
G67882 NA non-coding downstream 55037 2077303 ~ 2077602 (+)
G67899 NA non-coding downstream 126183 2148449 ~ 2148654 (+)
G67907 NA non-coding downstream 311225 2333491 ~ 2333944 (+)
G67908 NA non-coding downstream 327863 2350129 ~ 2373305 (+)
G67983 NA non-coding downstream 723978 2746244 ~ 2755484 (+)
AMCG00014111 NA other upstream 105915 1900220 ~ 1902687 (+)
G67801 NA other upstream 127561 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 170477 1835432 ~ 1838125 (+)
AMCG00014099 NA other upstream 510998 1479919 ~ 1497604 (+)
AMCG00014061 NA other upstream 1761600 136864 ~ 247002 (+)
G67896 NA other downstream 104606 2126872 ~ 2130145 (+)
AMCG00014146 NA other downstream 684574 2706840 ~ 2710329 (+)
AMCG00014196 NA other downstream 2105210 4127476 ~ 4131718 (+)
G68475 NA other downstream 2626934 4649200 ~ 4651964 (+)
G68830 NA other downstream 5323929 7346195 ~ 7349467 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000934 runx1 coding NC_007112.7 CM002885.2 1362932 ~ 1402303 (-)
grasscarp (Ctenopharyngodon idella) CI01000299_04864582_04885052 RUNX1 coding CI01000299 null 4864192 ~ 4885385 (+)