AMCG00014644 (dnajc3)


Basic Information

Item Value
gene id AMCG00014644
gene name dnajc3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25149803 ~ 25163635 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014644
GTGCAGTGTGGGAAGAATGCAGAAATGGAGAATCACCTGGAAATGGGAAAGAAATTGCTGGCTGCTGGACAGTTGGCAGATGCTCTGTCTCACTTTCATGCTGCTATAGATGGAGACCCCAAAAACTACATGGCTTATTACCGAAGAGCCACGGTTTATTTGGCTATGGGGAAATTCAAATCGGCACTGCCAGATCTCAGTAAAGTAATCGAAATAAAACCAGATTTCACCTCTGCAAGGCTGCAGAGAGGGAACCTGCTCCTGAAGCAAGGGAAACTAGATGAAGCGGAGAGAGACTTTAAGACCGTGCTCAAGTCCAATCCAATTGACAAAGAGGAGAAAGAAGCCAAGAGCCAGCTGATCAAATGTGATGAAATGCAGCGACTTGTGGCCCAAGCAAAGAGCGACTATCAGAGGAGGGATTACAGTGCAGCAGCTGCCCACCTTGATACACTCCTAGAGACTTGTGCTTGGGATTTCGGTTTACGGGAACTCCGAGCCGAGTGCTTCATCGAGATGGGAGAGATGGGGAAAGCGATCAGTGACCTTAAAGCTGCATCTAAACTGAAGAGTGACAACACTGAGGCCTTTTATAAGCTCAGCAACATTTACTACAACTTGGGAGATCATGAGATGTCACTGAATGAGATTAGGGAATGTCTGAAATTGGACCCAGACCACAAGCAGTGCTTCAGTCACTACAAACTGGTGAAGAAGCTCAACAAACAGATCACAGCTGCAGAGGAACTCATCCAGGAAGAAAGGTATGGAgatgctgtaaataaatatgaatcgGTTATGAAGACTGAAGCCAATGTGCCATATTACACACTTCAGGCCAAAGGAAGAATATGCCATTGTTTGTCTAAGAACCAGCAAGCGACTGAAGCCATTGCAGTCTGCAGTGAAGTCTTGAAGACGGAGCCTGAAAGTCTAAATGCCTTAAAAGACCGAGCTGAGGCTTACCTACAGGACGAACAGTATGAAGCAGCTGTTAAAGACTTTGAAACGGCCCGTGAGCACAATGAGAACGATCGGGAGATCAATGAAGGACTGGAGAGGGCACAGAGACTCCTTAAGCAGTCCCAGAAGAGAGACTACTACAAAATACTTGGCGTGAAGAGGAATGCCCAGAAAAAGGAAATCATTAAAGCGTACAGGAAGCTGGCACATCAGTGGCACCCAGACAACTTCCAAGATGAAACGGAAAAGAAAAACGCAGAGAAGAAATTCATTGATATTGCTTCTGCCAAAGAGGTTCTTGTGGATCCAGAAATGAGGAGGAAGTTCGATGCAGGGGAGGATCCACTGGACCCAGAGAACCAGCAGGGCGGGGGTGGGCCCAACTTCCAGAGAGGCTGGAACACCTGGCAGGGATTCAACCCCTTCGGCTCGGGACCCTTTAACTTCAAATTCAACTTCAACAACTAG

Function

symbol description
dnajc3 Predicted to enable several functions, including chaperone binding activity; misfolded protein binding activity; and protein kinase inhibitor activity. Involved in negative regulation of apoptotic process and negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation. Located in extracellular exosome and membrane.

NR:

description
PREDICTED: dnaJ homolog subfamily C member 3

GO: NA

KEGG:

id description
K09523 DNAJC3; DnaJ homolog subfamily C member 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014644 True 1431 mRNA 0.47 11 25149803 25163635

Neighbor

gene id symbol gene type direction distance location
AMCG00014646 NA coding upstream 23758 25124094 ~ 25126045 (+)
AMCG00014643 NA coding upstream 47165 25087014 ~ 25102638 (+)
AMCG00014637 NA coding upstream 211838 24928031 ~ 24937965 (+)
AMCG00014638 NA coding upstream 252794 24888533 ~ 24897009 (+)
AMCG00014636 LOC108414264,LOC103139365,LOC102217784,LOC103461949 coding upstream 390506 24692286 ~ 24759297 (+)
AMCG00014648 hs6st3,LOC105898056,LOC102202054,LOC101476457,LOC100690379 coding downstream 81778 25245413 ~ 25245961 (+)
AMCG00014649 LOC105024749,LOC106586266,LOC106582445 coding downstream 209751 25373386 ~ 25374072 (+)
AMCG00014651 mbnl2,LOC107677847,LOC107653675,LOC107555253,LOC107559795 coding downstream 316156 25479791 ~ 25505003 (+)
AMCG00014653 rap2a,LOC101166017,LOC106512668,LOC105907999,LOC105933629,LOC100695037,LOC103391592,LOC106582448 coding downstream 358591 25522226 ~ 25530849 (+)
AMCG00014652 NA coding downstream 401522 25565157 ~ 25574008 (+)
G71670 NA non-coding upstream 40425 25109156 ~ 25109378 (+)
G71662 NA non-coding upstream 66925 25082659 ~ 25082878 (+)
G71598 NA non-coding upstream 616842 24523645 ~ 24532961 (+)
G71596 NA non-coding upstream 816506 24332431 ~ 24333297 (+)
G71584 NA non-coding upstream 1241154 23908385 ~ 23908649 (+)
G71725 NA non-coding downstream 369707 25533342 ~ 25534154 (+)
G71763 NA non-coding downstream 541823 25705458 ~ 25762742 (+)
G71772 NA non-coding downstream 582168 25745803 ~ 25748408 (+)
G71784 NA non-coding downstream 606574 25770209 ~ 25770489 (+)
G71817 NA non-coding downstream 788598 25952233 ~ 25959702 (+)
G71525 NA other upstream 2294157 22855342 ~ 22855646 (+)
G71004 NA other upstream 6875443 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 7662753 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 8680594 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 9010771 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 1741242 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 2671868 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 2705068 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 3138738 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 3633414 28797049 ~ 28837910 (+)

Expression


Co-expression Network