AMCG00014657


Basic Information

Item Value
gene id AMCG00014657
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25608988 ~ 25630854 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014657
ATGGGGGACCCGGAGTCGAGACCGACTGCTGGCCAGCGGCTGGGCGCTCAGGAGAGCATGGGCATCAGCACCCTGGAGCCCGGGCAGAGACCGCCCAGCATGCCACCAGGAAGACACGTTTCCATCAAGGTGCAAATGCTGGACGAAACGGAGGAAGTGTTTGAGGTGTCGAGGAGGAATGAGCCGTGGCTTTATGATCCCAGTGAGGAGGTTAAAGGACCGCCTGACAATCTCTACATTGTTTCGTCGGCCCCGAGAGGATTCCAAGGAGGCTTGGGTCATCAGGGCCTTGAGGGGGGCAGGGTTGCGCAGGGTGACCCGGACACGCGGAAGGTCAGCCGAGCAGACGTCTCGGAGCCGAGGTATTTACAGAGCTCCTCAGACAATGGGGAGTCCATAGCTGGCTGTAGTACAGTGCTTTTCTGCACAGCCTCGGTTCAAAAGCTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014657 True 450 mRNA 0.59 4 25608988 25630854

Neighbor

gene id symbol gene type direction distance location
AMCG00014654 kpnb3,ipo5,LOC107677849 coding upstream 16421 25575240 ~ 25592567 (+)
AMCG00014652 NA coding upstream 34980 25565157 ~ 25574008 (+)
AMCG00014653 rap2a,LOC101166017,LOC106512668,LOC105907999,LOC105933629,LOC100695037,LOC103391592,LOC106582448 coding upstream 78139 25522226 ~ 25530849 (+)
AMCG00014651 mbnl2,LOC107677847,LOC107653675,LOC107555253,LOC107559795 coding upstream 103985 25479791 ~ 25505003 (+)
AMCG00014649 LOC105024749,LOC106586266,LOC106582445 coding upstream 234916 25373386 ~ 25374072 (+)
AMCG00014655 LOC107559785 coding downstream 29491 25660345 ~ 25698928 (+)
AMCG00014661 gpr18,LOC107740919,LOC107681324,LOC107600424,LOC107748622,LOC107668869 coding downstream 303627 25934481 ~ 25941543 (+)
AMCG00014660 tm9sf2,LOC106574826,LOC107705039,LOC107719731,LOC107654273,LOC107556717 coding downstream 405579 26036433 ~ 26052543 (+)
AMCG00014665 NA coding downstream 455005 26085859 ~ 26123768 (+)
AMCG00014664 zic2,LOC106586042 coding downstream 537607 26168461 ~ 26172474 (+)
G71725 NA non-coding upstream 74834 25533342 ~ 25534154 (+)
G71670 NA non-coding upstream 499610 25109156 ~ 25109378 (+)
G71662 NA non-coding upstream 526110 25082659 ~ 25082878 (+)
G71598 NA non-coding upstream 1076027 24523645 ~ 24532961 (+)
G71596 NA non-coding upstream 1275691 24332431 ~ 24333297 (+)
G71763 NA non-coding downstream 74604 25705458 ~ 25762742 (+)
G71772 NA non-coding downstream 114949 25745803 ~ 25748408 (+)
G71784 NA non-coding downstream 139355 25770209 ~ 25770489 (+)
G71817 NA non-coding downstream 321379 25952233 ~ 25959702 (+)
G71826 NA non-coding downstream 379945 26010799 ~ 26011000 (+)
G71525 NA other upstream 2753342 22855342 ~ 22855646 (+)
G71004 NA other upstream 7334628 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 8121938 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 9139779 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 9469956 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 1274023 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 2204649 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 2237849 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 2671519 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 3166195 28797049 ~ 28837910 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_02232969_02292077 FARP2 coding CI01000340 null 2232969 ~ 2292077 (+)