Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014777 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 30764351 ~ 30812287 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014777 | True | 432 | mRNA | 0.41 | 3 | 30805623 | 30812287 |
| TU90928 | False | 281 | TUCP | 0.49 | 3 | 30764351 | 30805741 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014768 | NA | coding | upstream | 23207 | 30728363 ~ 30741144 (+) |
| AMCG00014774 | NA | coding | upstream | 53931 | 30700206 ~ 30710420 (+) |
| AMCG00014779 | NA | coding | upstream | 103756 | 30659601 ~ 30660595 (+) |
| AMCG00014772 | NA | coding | upstream | 154247 | 30594129 ~ 30610104 (+) |
| AMCG00014770 | NA | coding | upstream | 215829 | 30545213 ~ 30548522 (+) |
| AMCG00014771 | NA | coding | downstream | 34885 | 30847172 ~ 30851142 (+) |
| AMCG00014781 | NA | coding | downstream | 94882 | 30907169 ~ 30917566 (+) |
| AMCG00014784 | NA | coding | downstream | 211256 | 31023543 ~ 31027002 (+) |
| AMCG00014783 | NA | coding | downstream | 229604 | 31041891 ~ 31044741 (+) |
| AMCG00014787 | vangl1,LOC106574540 | coding | downstream | 429014 | 31241301 ~ 31264255 (+) |
| G72426 | NA | non-coding | upstream | 1572073 | 29191971 ~ 29192278 (+) |
| G72415 | NA | non-coding | upstream | 1603926 | 29157025 ~ 29160425 (+) |
| G72409 | NA | non-coding | upstream | 1626998 | 29137129 ~ 29137353 (+) |
| G72354 | NA | non-coding | upstream | 1773052 | 28989607 ~ 28991299 (+) |
| G72353 | NA | non-coding | upstream | 1778775 | 28981122 ~ 28985576 (+) |
| G72767 | NA | non-coding | downstream | 24549 | 30836836 ~ 30837169 (+) |
| G72768 | NA | non-coding | downstream | 29273 | 30841560 ~ 30844670 (+) |
| G72769 | NA | non-coding | downstream | 33875 | 30846162 ~ 30846421 (+) |
| G72783 | NA | non-coding | downstream | 143618 | 30955905 ~ 30956284 (+) |
| G72789 | NA | non-coding | downstream | 191085 | 31003372 ~ 31003788 (+) |
| G72605 | NA | other | upstream | 912530 | 29851450 ~ 29851821 (+) |
| AMCG00014757 | LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 | other | upstream | 917765 | 29843467 ~ 29846586 (+) |
| AMCG00014738 | NA | other | upstream | 1485202 | 29268329 ~ 29279149 (+) |
| AMCG00014739 | NA | other | upstream | 1507997 | 29247875 ~ 29256354 (+) |
| AMCG00014729 | NA | other | upstream | 1926441 | 28797049 ~ 28837910 (+) |
| G72785 | fam160a2 | other | downstream | 165929 | 30978216 ~ 30978825 (+) |
| G72786 | NA | other | downstream | 167283 | 30979570 ~ 30980252 (+) |
| G72787 | NA | other | downstream | 177776 | 30990063 ~ 30996363 (+) |
| AMCG00014786 | nhlh2,LOC106574539,LOC107739819,LOC105019883 | other | downstream | 331136 | 31143423 ~ 31147877 (+) |
| AMCG00014793 | NA | other | downstream | 700521 | 31512808 ~ 31523187 (+) |
