AMCG00014800


Basic Information

Item Value
gene id AMCG00014800
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31681531 ~ 31696173 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014800
AAGGATTTACATGAACTATTCAGGAAGAATAAAATCCATTGACAGTCAGAGAGTTTTTATGTAttggttttaaataaaggatGCATTTGAATGTGCAGTGTACGAAATGAACAATTCACTGGTGCTTCTTTTCATATGTTGAGaagaagacttttttttaaactatAGCTTTTTCTGTCAATTCCCAAAGCAAGAGATTTCTGCATTGGGTTTTCAGCTCAGAATGAAGGGACTTTATTGCAAGCTAAGTGAAAGTGCAGAACAAGTGAGGTTTGTCATCCAAGAAACGGAAATTCCAAATGTGCTCGGCAGCCATTGTGTCAAAGTTCAAGTAAAGGCCTGTGCACTTAGTCCACTTGATATCAAGCTCCTGAAAGACCTGAAGTTGCAAAGAGAGTTGGTGCCAGTGGGCAGAGAAATTGCCGGCGTTGTGCTTGAAGttgGACCAAAGGTTACATTTTTTCAACCTGATGATGAAGTTGTGGCCGTTTGGTATAATTACCATCCAGTTAGCTCATTACCATGGAGCAAAGGTGCTGTCTACCACTTTGTCAGTTGAAGACAAGCAGTTTCTGGAGCAGTTACGACCAACCATTGCCAGGGTGATAAACATGTCAGATGGGAAGGCTGACCTGGTGGAAGTCTGTCTGGAGGAAACCGGTGGCCTGGGAGTGGACATTGTCATTGACGCTGGAGTGCGGCTGTACAACACAGATGAGGAAACAGCAATCAAAAAACTCCTCCCTCACAAGCACGACATCATCATGCTTCTGGCTGTTGGAGGTCACTGGGTCACCGCAGAAGAAGGCTTACAGCTGGACCCTCCAGACAGCCGAAGCCTCTTTCTGAAAGGAGCCACTCTTTCCTTCTTGAACGAGGAGGTGTGGAACGCCTCCAGTGCTTGCCAAGGGAAGTACCTCCATATAATGAAAGATGTGGTTGAGAAGCTATCAAATGGGACATTCAGGCCGCAGTTGGAAGACCCAGTTCCTTTGTACGAAGCCACCGTTTCCATGGAAATGGTTCAGAAGAAGCAAGTCAGGAAGAGGCACGTTATTCATCTCTGAGGCCCTAGAGTCCAGCGAAAGCAAGCATGTCTCTGGAACGCTGCCGCAACattcagaaaaaggaaaaagaaaagaaagaaaggaagggcCTGTACACATTTGCTCCGAGCTGGAGTCATCCTGTGTTTGAAAGGACTTGCATCGTGTGATTGCATCTTCCCCAAAAAAGCAAGCAGTAAGTTTTTTAGATGCTGTACATAGTACTTCACAATTCCCACACAGATGTCTGTTTCTTCTCACTAGATCAGCCCCTCATCCAACCCATTTGTAGATGTCCGATGTTTGAAACATCCACCAGGACATCCAGTGTGCTTGGCATCTTATGATGTGATGTGCCGACTCTTGTtatcagtaaataaatgcattccaA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014800 True 1437 mRNA 0.45 11 31681531 31696173

Neighbor

gene id symbol gene type direction distance location
AMCG00014792 NA coding upstream 350856 31312973 ~ 31330675 (+)
AMCG00014788 poglut1 coding upstream 373269 31297750 ~ 31308262 (+)
AMCG00014787 vangl1,LOC106574540 coding upstream 417276 31241301 ~ 31264255 (+)
AMCG00014783 NA coding upstream 636790 31041891 ~ 31044741 (+)
AMCG00014784 NA coding upstream 654529 31023543 ~ 31027002 (+)
AMCG00014801 NA coding downstream 11075 31707248 ~ 31709519 (+)
AMCG00014798 NA coding downstream 31113 31727286 ~ 31741350 (+)
AMCG00014804 NA coding downstream 57103 31753276 ~ 31763835 (+)
AMCG00014805 NA coding downstream 68007 31764180 ~ 31765038 (+)
AMCG00014803 NA coding downstream 69891 31766064 ~ 31769661 (+)
G72875 LOC103376870 non-coding upstream 89426 31524315 ~ 31592105 (+)
G72861 NA non-coding upstream 217720 31462146 ~ 31463811 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding upstream 394097 31278087 ~ 31287434 (+)
G72789 NA non-coding upstream 677743 31003372 ~ 31003788 (+)
G72783 NA non-coding upstream 725247 30955905 ~ 30956284 (+)
G72911 NA non-coding downstream 5989 31702162 ~ 31702435 (+)
G72912 NA non-coding downstream 6973 31703146 ~ 31703573 (+)
G72926 NA non-coding downstream 49350 31745523 ~ 31746900 (+)
G73017 NA non-coding downstream 269749 31965922 ~ 31966189 (+)
G73018 NA non-coding downstream 271183 31967356 ~ 31969205 (+)
AMCG00014793 NA other upstream 158344 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 533654 31143423 ~ 31147877 (+)
G72787 NA other upstream 685168 30990063 ~ 30996363 (+)
G72786 NA other upstream 701279 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 702706 30978216 ~ 30978825 (+)
G72925 NA other downstream 20945 31717118 ~ 31754930 (+)
AMCG00014799 NA other downstream 94728 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 243380 31939553 ~ 31962971 (+)
G73103 NA other downstream 846337 32542510 ~ 32561489 (+)
G73244 NA other downstream 1668582 33364755 ~ 33366100 (+)

Expression


Co-expression Network