AMCG00014825


Basic Information

Item Value
gene id AMCG00014825
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 33070249 ~ 33119328 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014825
ATGTCATACCAAATTATCAAACAGGGCAAGCCCAAAAAAAGAGGGCTGGTTGGAGCATTCAGGAGCACACTTCAATTCAAGTTCACAGCCAAAGTGGAGACCAGCACGGTGTGGATACAGTCTGACTCTGAGGGTTTACTGAAGAAAACGTACATTTTATCTAACTATCTGCAAAAGGATTCGATAGATGTAAACACTGCGGTGGATCTCATTGACAGCTGCGTGGCTCAGATCAGACATATGCACAGTGATGAGGCCTATGACCAGATGGAGAACACTGCAAAAGAGATGGCCCGACAGAACAACGCTACCACTGAGTTTGCAGAAAAGAATGCAACCAAAGAAATGTCTGGGCACTAA
>TU91487
cgaCGGAGGAAGTCGGGGAGAAAGATGAATGAGTCGCGCGGGGAAGATGTAGGTTTAGATAAATGTTGTGAACAACggaatgttttccttttggCTTTGTtagttatgtaaaatgttttcctgagcGTTAATTTAGTTCTTAAGAGATTTCAGACACACAAGGATTAAAGACTTGTTGCTGACGTGTGTTTTTTGGGCTCGAGTCGCCGGcgccagtgtttgttttgttgaatttaaACCAATGGCGATCAGGACCAGAGTTTCCACTGAAACCAGAGCAAGATGCCGATGGAGTCTTCAGACAGATGCAACCAAAGAAATGTCTGGGCACTAAACAAGGGGACATCAGGAAGACTCAACGGAATATTCAACGAGCTTCATTACcagctgaaggagaaggaggacacCAGCCCTTCATCTGGACACtgtgttatttaattgttaattgccCCGGGACAGAGGCGATCAGGTGCCATTTTTATACACTTGCATGTGTTTAGAGCTTCCACTGGACCTGTGCGTGTCTAGAAGTCATCTGTTTATTACGGCAATTCATTCACCTTCTGCAAGTATATACATGGTTTTATGTTATTGCTCgttttattgttagttgtacttgttaagttgtagtttttagcaaaagctatacagtgctgtgacgagatacattcagaaaacagtgcagcGCCCTGTAGCGCAGTCTTCCAagtgtattgaaataaaaaaaatcaatatggCAGAGCAAGTTGGTGATGGCACAGATTTTGATTGTGactgagttttagttgatagttactgttcattgtttattatagcgtttcagtgcattttcatttgcgttaactttgtattatttgtatttgttttatttgtattttagtgtttttatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014825 False 360 mRNA 0.45 4 33070806 33119328
TU91487 True 891 lncRNA 0.40 2 33070249 33071524

Neighbor

gene id symbol gene type direction distance location
AMCG00014823 slc10a2 coding downstream 276824 32791881 ~ 32793425 (-)
AMCG00014818 NA coding downstream 416829 32650176 ~ 32653420 (-)
AMCG00014819 NA coding downstream 421254 32647534 ~ 32648995 (-)
AMCG00014820 NA coding downstream 428317 32628832 ~ 32641932 (-)
AMCG00014814 NA coding downstream 747490 32321974 ~ 32322759 (-)
AMCG00014826 NA coding upstream 8350 33127678 ~ 33434382 (-)
AMCG00014828 NA coding upstream 1445158 34564486 ~ 34565202 (-)
AMCG00014829 efnb2a coding upstream 1791265 34910593 ~ 34931646 (-)
AMCG00014830 arglu1,LOC106586866 coding upstream 1823647 34942975 ~ 34960249 (-)
AMCG00014832 NA coding upstream 2053541 35172869 ~ 35180639 (-)
G73187 NA non-coding downstream 279851 32789023 ~ 32790398 (-)
G73184 NA non-coding downstream 358546 32711247 ~ 32711703 (-)
G73183 NA non-coding downstream 359204 32710797 ~ 32711045 (-)
G73182 NA non-coding downstream 360134 32709844 ~ 32710115 (-)
G73181 NA non-coding downstream 361966 32708013 ~ 32708283 (-)
G73232 NA non-coding upstream 128009 33247337 ~ 33247621 (-)
G73242 NA non-coding upstream 200097 33319425 ~ 33319625 (-)
G73245 NA non-coding upstream 246380 33365708 ~ 33366083 (-)
G73259 NA non-coding upstream 526605 33645933 ~ 33702805 (-)
G73260 NA non-coding upstream 659665 33778993 ~ 33779193 (-)
AMCG00014824 NA other downstream 263954 32795005 ~ 32806295 (-)
G73127 NA other downstream 451100 32597462 ~ 32619149 (-)
AMCG00014816 NA other downstream 514304 32455306 ~ 32555945 (-)
G73047 NA other downstream 806822 32263167 ~ 32263427 (-)
AMCG00014775 NA other downstream 2223449 30841523 ~ 30846800 (-)
G73328 LOC101154678 other upstream 1650255 34769583 ~ 34769979 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 2461298 35580626 ~ 35608677 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other upstream 2982030 36101358 ~ 36182351 (-)
G73612 NA other upstream 3134446 36253774 ~ 36254187 (-)
AMCG00014845 NA other upstream 3253823 36373151 ~ 36393493 (-)

Expression


Co-expression Network