G73260


Basic Information

Item Value
gene id G73260
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 33778993 ~ 33779193 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91533
GGAAAGGGTTCCCTGTCCTGGGGTTAGAGACTtacctgctgtgatttatttttcggtCTTTGTGATGCAGACGGGTGACTGCGGGATAGAAGaaaagacattaattaattacatttgaatttgtgcaATTGGAGACTTGCTAATACttgttcctacctgcagttgttgaggtcccagttggccgacaGGGTTCCAACCCAG

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process
GO:0005634 nucleus cellular_component
GO:0008094 DNA-dependent ATPase activity molecular_function

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU91533 True 201 lncRNA 0.45 1 33778993 33779193

Neighbor

gene id symbol gene type direction distance location
AMCG00014826 NA coding downstream 344611 33127678 ~ 33434382 (-)
AMCG00014823 slc10a2 coding downstream 985568 32791881 ~ 32793425 (-)
AMCG00014818 NA coding downstream 1125573 32650176 ~ 32653420 (-)
AMCG00014819 NA coding downstream 1129998 32647534 ~ 32648995 (-)
AMCG00014820 NA coding downstream 1137061 32628832 ~ 32641932 (-)
AMCG00014828 NA coding upstream 785293 34564486 ~ 34565202 (-)
AMCG00014829 efnb2a coding upstream 1131400 34910593 ~ 34931646 (-)
AMCG00014830 arglu1,LOC106586866 coding upstream 1163782 34942975 ~ 34960249 (-)
AMCG00014832 NA coding upstream 1393676 35172869 ~ 35180639 (-)
AMCG00014838 LOC106600244 coding upstream 1855794 35634987 ~ 35688097 (-)
G73259 NA non-coding downstream 76188 33645933 ~ 33702805 (-)
G73245 NA non-coding downstream 412910 33365708 ~ 33366083 (-)
G73242 NA non-coding downstream 459368 33319425 ~ 33319625 (-)
G73232 NA non-coding downstream 531372 33247337 ~ 33247621 (-)
G73187 NA non-coding downstream 988595 32789023 ~ 32790398 (-)
G73264 NA non-coding upstream 9663 33788856 ~ 33789222 (-)
G73268 NA non-coding upstream 31837 33811030 ~ 33811318 (-)
G73270 NA non-coding upstream 73502 33852695 ~ 33853024 (-)
G73288 NA non-coding upstream 344085 34123278 ~ 34123649 (-)
G73291 NA non-coding upstream 416774 34195967 ~ 34196246 (-)
AMCG00014825 NA other downstream 659665 33070249 ~ 33119328 (-)
AMCG00014824 NA other downstream 972698 32795005 ~ 32806295 (-)
G73127 NA other downstream 1159844 32597462 ~ 32619149 (-)
AMCG00014816 NA other downstream 1223048 32455306 ~ 32555945 (-)
G73047 NA other downstream 1515566 32263167 ~ 32263427 (-)
G73328 LOC101154678 other upstream 990390 34769583 ~ 34769979 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 1801433 35580626 ~ 35608677 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other upstream 2322165 36101358 ~ 36182351 (-)
G73612 NA other upstream 2474581 36253774 ~ 36254187 (-)
AMCG00014845 NA other upstream 2593958 36373151 ~ 36393493 (-)

Expression


Co-expression Network