Gene
RNA
| Item | Value |
|---|---|
| gene id | G74978 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 41269927 ~ 41270183 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU93617 | True | 257 | lncRNA | 0.42 | 1 | 41269927 | 41270183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014967 | NA | coding | downstream | 43120 | 41177884 ~ 41226807 (-) |
| AMCG00014962 | NA | coding | downstream | 279136 | 40989672 ~ 40990791 (-) |
| AMCG00014959 | LOC107676178 | coding | downstream | 347061 | 40912194 ~ 40922866 (-) |
| AMCG00014957 | NA | coding | downstream | 371227 | 40886015 ~ 40898700 (-) |
| AMCG00014950 | naga,nagab,LOC102776695 | coding | downstream | 838885 | 40429382 ~ 40431042 (-) |
| AMCG00014972 | polr2f,LOC107727050,LOC107711805 | coding | upstream | 143229 | 41413412 ~ 41416011 (-) |
| AMCG00014974 | LOC108424764 | coding | upstream | 151678 | 41421861 ~ 41435628 (-) |
| AMCG00014973 | ddx17,LOC101071115 | coding | upstream | 182260 | 41452443 ~ 41460863 (-) |
| AMCG00014975 | dmc1 | coding | upstream | 193411 | 41463594 ~ 41469552 (-) |
| AMCG00014977 | NA | coding | upstream | 218706 | 41488889 ~ 41515465 (-) |
| G74970 | NA | non-coding | downstream | 6020 | 41262768 ~ 41263907 (-) |
| G74950 | NA | non-coding | downstream | 58616 | 41211039 ~ 41211311 (-) |
| G74910 | NA | non-coding | downstream | 226344 | 41042098 ~ 41043583 (-) |
| G74905 | NA | non-coding | downstream | 269275 | 40999853 ~ 41000652 (-) |
| G74882 | NA | non-coding | downstream | 387504 | 40882192 ~ 40882423 (-) |
| G75032 | sox10,LOC106607141,LOC106601158,LOC107104518 | non-coding | upstream | 135279 | 41405462 ~ 41405799 (-) |
| G75035 | NA | non-coding | upstream | 136734 | 41406917 ~ 41409612 (-) |
| G75064 | NA | non-coding | upstream | 179907 | 41450090 ~ 41451333 (-) |
| G75145 | NA | non-coding | upstream | 381153 | 41651336 ~ 41673042 (-) |
| G75144 | NA | non-coding | upstream | 399973 | 41670156 ~ 41672310 (-) |
| G74945 | NA | other | downstream | 100376 | 41169041 ~ 41169551 (-) |
| G74890 | NA | other | downstream | 335973 | 40931797 ~ 40933954 (-) |
| G74887 | NA | other | downstream | 344490 | 40922964 ~ 40925437 (-) |
| AMCG00014958 | NA | other | downstream | 360476 | 40906225 ~ 40909451 (-) |
| G74870 | NA | other | downstream | 486697 | 40782840 ~ 40783230 (-) |
| AMCG00014964 | kdelr3,LOC108262534,LOC107679478,LOC106607138 | other | upstream | 59130 | 41329313 ~ 41331770 (-) |
| AMCG00014971 | NA | other | upstream | 200111 | 41470294 ~ 41474481 (-) |
| AMCG00014978 | NA | other | upstream | 268103 | 41538286 ~ 41561967 (-) |
| AMCG00014981 | NA | other | upstream | 485423 | 41755606 ~ 41766826 (-) |
| AMCG00015010 | csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 | other | upstream | 790107 | 42060290 ~ 42063901 (-) |
