G75247


Basic Information

Item Value
gene id G75247
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41993563 ~ 42022081 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93949
CAAAAAGGGtcagtgcttgtgtgtgtgacactgcTGCACAATATCCATTAACTGGTAAGGAAAAAATACAGGATCGTCAatcttagaaaaacaaacagtcttTAATGTCTGTAGCAGGTGGGAATTCTAGGGCCGGCCTCCAACCCACTCCAGGACAAGATTTAGGTACAACCAGCTATTCCTTAATTCTGTAATTGGATTAACAACTCATTAAATGAGCTGGTAGTAGCTTTACAAAATTGCACTGTACTACATTGGAAGGTTGAATAGTTGACTGAACAAGGTCTGTGGGACACAAGCAAGCTGGGGTCTCAAGCCCGGGTCCTGGAGAGacagtacagtccagtacagcaggggttcccaatcctAGTCCtagaccccctaccctgctgttttttgttctaagtgaactcccaattacttaattgaagtaacaacctgcttagatttgactttttgtgtaatttgtgtaataaaagagttggttcttaaataagtgatttatacaattctatacttaacttaaaacccctactgtttaaaattattttaaaaggctctAATTTAGGAAATTCTTATTTGAATTAAGGGTTCAAagtaagtaattgagagctcagttggaacaaaaatcagcagagTAGAGGGACctccagggttgagaaccactgcagtACAGCAAGGTCTCCAGCCCTGGGTATGGAGAGAGacagcacagtacagttttacaaacatttacacacaaaaatacattgttataaaaaaggcaaattacagaaacaattcaaaataaccAAGGCAACTTAATAATTAAGAACAGGCAGTTTCTTTTAAGGTCTTCATAAAAaccaatacaatatttattttacaacaatacgataaaaagtaaaatatatattttttggctcTTTTACTTTTCTGCACATTTCTCTCAGGTTTGGGGAAATTGGGGAGTAACAGCAGGAGAATAAATAGAAGCACAGACAGTCCAATAGGAATAAACAACCACTGATGGGCCACCGTTGGCAGCTGGTCACTCGGTGGCCTTATCATCTGGTCACGTCTTTGAGGTTTGATtgacagcaacaaaaaaacaaggttCTCTATCAACCCATTATAGGCCTACATCACTGAATACAGTACGGCTCgattatatatacatgtcatACATAAACTCAACAGGTATAATCTGTAGTCACCCAGAGtccagtgtagtacagtacacacacacacacacagctggagtccagtgtagtacagtacacacacacacacacacacagctggagtccagtgtggtacagtacacacacagctGATATAGACACTGACTGgagacactgtactgtagtagGCCTAGTTTAATCAGTGCAGTATAACTCAGTAGAGTATAGCTCATTATTGTACAGTAGAGTATGgctcagtacagtacaatacagtccAGCTCAGTATATTCCCTCATTGACAGTGAAGCTGCTGGTACAGAATGAAGCCTCCCCCAGCTGTAGAGAtgtattaccattattattactattattgttctGTTCAGTTACCCACTTGACTCTCAACCTCTGCTTCAACTCATACGGTCATATGTAGCAGTTTAGTTTttgacagtaataataatgatatatacaaacaatgtagaaaataaaatacagggcTACATCGCTATCCTACATCCTGGATCCATGGATTTGAAAAAGCTGCaatgaaaaagacagagagcaagagaggagagagagggggagagaaggagtAGAAGGCATTACTGATAAAGCCCATCTTGCGACACTCTGAGAATCCATCTGTCGGAAAATAGGttggaaatatattgcagaaaatGACCTGgccatatatatttaaaacatgtaaattaaatatggattacagtttcaaatatattttaaatatacccaacacatatttaaaatatacaaaaaggggGGCATTTCAGACTTATGAAAACTATAAGGATCACGTGTTTCACtcctatattaaaaatacaggaTTGTTCTCAGGATTCTCACACTGCAGCTACCAATCAGAGGGTCAGATCTCCAGTCACTGGAGTCAGTGcgcactgtgtgtgtatgtgtttctttgtgtgagtgactctctctctctctctctctctctCTGTGAGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93949 True 2146 lncRNA 0.39 2 41993563 42022081

Neighbor

gene id symbol gene type direction distance location
AMCG00014990 NA coding downstream 4856 41985975 ~ 41988707 (-)
AMCG00014989 NA coding downstream 10764 41979321 ~ 41982799 (-)
AMCG00014991 NA coding downstream 24851 41966064 ~ 41968712 (-)
AMCG00014992 LOC107591697,LOC107720054,LOC102309547 coding downstream 143794 41845859 ~ 41849769 (-)
AMCG00014993 sh3bp1,LOC107690072,LOC107734168,LOC107692101,LOC107554025,LOC107584210,LOC107731399,LOC108273824 coding downstream 155842 41828109 ~ 41837721 (-)
AMCG00015001 NA coding upstream 1021 42023102 ~ 42038200 (-)
AMCG00015008 NA coding upstream 41916 42063997 ~ 42070963 (-)
AMCG00015007 aco2,LOC107554054,LOC107692062,LOC107584097,LOC107734200,LOC107731401,LOC103370792 coding upstream 60963 42083044 ~ 42097284 (-)
AMCG00015006 tef,LOC101073097 coding upstream 84816 42106897 ~ 42112141 (-)
AMCG00015012 NA coding upstream 99582 42121663 ~ 42123872 (-)
G75241 NA non-coding downstream 1586 41977755 ~ 41991977 (-)
G75170 NA non-coding downstream 178302 41812333 ~ 41815261 (-)
G75145 NA non-coding downstream 320521 41651336 ~ 41673042 (-)
G75144 NA non-coding downstream 321253 41670156 ~ 41672310 (-)
G75064 NA non-coding downstream 542230 41450090 ~ 41451333 (-)
G75333 NA non-coding upstream 145443 42167524 ~ 42167876 (-)
G75364 NA non-coding upstream 264213 42286294 ~ 42286584 (-)
G75365 NA non-coding upstream 264577 42286658 ~ 42286893 (-)
G75367 NA non-coding upstream 267108 42289189 ~ 42289415 (-)
G75368 NA non-coding upstream 267509 42289590 ~ 42289858 (-)
AMCG00014981 NA other downstream 226737 41755606 ~ 41766826 (-)
AMCG00014978 NA other downstream 431596 41538286 ~ 41561967 (-)
AMCG00014971 NA other downstream 519082 41470294 ~ 41474481 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 661793 41329313 ~ 41331770 (-)
G74945 NA other downstream 824012 41169041 ~ 41169551 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other upstream 38209 42060290 ~ 42063901 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 97206 42119287 ~ 42131232 (-)
G75370 NA other upstream 269840 42291921 ~ 42292295 (-)
AMCG00015023 NA other upstream 299015 42321096 ~ 42325005 (-)
AMCG00015031 NA other upstream 486788 42508869 ~ 42521901 (-)

Expression


Co-expression Network