AMCG00015468


Basic Information

Item Value
gene id AMCG00015468
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9973956 ~ 9986628 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015468
ATGCAGCCCATTACCGTGGTCACCATCTGCCTCTcaTCTCCACCTCTCCTGGAGGGGGCGCTGTCAGTGcATATCCAGTACAAGATCTTCTACCAGAACCAGACCTGTGTGCGGTCACCACTGGACACCCGGTTCCGGCCCCTGGAGGTCCCCCCCGACGCCCAGTTCTTGACACAGATGGTCGTTGGGGGGTCGTCCCAGCCTGGCGAGGGGGTTCTTGGCAACCAGTGGACCGGGAAAATACCCGAGACaaagggGACCTATTACACCCTCGTCTCCGAGTTCGGATGCCTCCCCCTGTCTGACTTGTACTATGACGCCCATGGTCTGTGGATCACCACgtttTATGACTTGATCACAGGGATCCGGGACCCCAATGTGTTTatccctccctccttctgtGACAAGGGGATCAGCCTGGAGGCGCTCTAAGCTTCTTTCCGTGGGACTCATGGGTGGGGGAAGGGGTAGAGTGGGTGGGTAAGCTAGCCAATATACCGCAGCAGGGGTctccagtcctggtcctggagagctacaaTTTAGTCTAGTCCAATTAGTGCAGTCCGGTCCACGATTCCCTGTGTCTGCTGGCTGCTGTCAGTCCAGCCCTGTGGTGTCCTACTGACCTGAGCGGTCCTGCAGCTGTTTGAGAGCGGAGAGCAGGTGGTCGGGCCGAGACCGACCCCTCACTGAGACCTCAGCTCAGAGCTCGGCCCAGCTCACAGggagtcctccaggaccaggtctGGGAGCCACTGCTGGGAGCCAACACTGGCCCAACCCTGCTCCGGCACAGattaatcaataaacaaactCTGATTTGGAACACAATGTCCAtgctttcatatttattattaatgttattattactattattatggcACTTCCTACTCTTGTTACAGGGTCAGAGTTCAGG
>TU122412
CTGAATTCTGACACCTATAACCCTGAGCCCTATAAGCTTGAACTCTCACCCCTCTAGAagtaatggtaataaaataataataatgactatgACAGCATGGACATTGTGTTCCAAATTAGTGCTTGTTTattgatgaatgaatgaatgaatgaatgaacaggCCCACTCAGGACACCGTGGGGGTGGGTAGGTTCAGCACATCTGCTCTGTGCTCCAGCCTGGCCCTCCGCTCCTCAACTGACACCAATGACACAATGATCACACCACACTGACCCCTGACCTTCCCCGGGCCCCCACCTGACAAGGGGCCTCAGGATCTGGAATCAGTCGATTGACCGTGGGAGAATCTCAAACAGGCCGACATAGGGTGATCCAAACTGAACTGGACTGGATTGCAATGTGTTGGATGGATGTTGATTGGTCAGCCTACCCCCCCTCCACTTCAGTCCCATGGAGGGACACTCAGAGCACCTCCGGCCTGCTCCCCTTCTCCTCACAGAAGGGGGGAGGGATGAACACATTGGGGTCCCGCTTGTACTATGACGCCCATGGTCTGTGGATCACCACgtttTATGACTTGATCACAGGGATCCGGGACCCCAATGTGTTTatccctccctccttctgtGACAAGGGGATCAGCCTGGAGGCGCTCTAAGCTTCTTTCCGTGGGACTCATGGGTGGGGGAAGGGGTAGAGTGGGTGGGTAAGCTAGCCAATATACCGCAGCAGGGGTctccagtcctggtcctggagagctacaaTTTAGTCTAGTCCAATTAGTGCAGTCCGGTCCACGATTCCCTGTGTCTGCTGGCTGCTGTCAGTCCAGCCCTGTGGTGTCCTACTGACCTGAGCGGTCCTGCAGCTGTTTGAGAGCGGAGAGCAGGTGGTCGGGCCGAGACCGACCCCTCACTGAGACCTCAGCTCAGAGCTCGGCCCAGCTCACAGggagtcctccaggaccaggtctGGGAGCCACTGCTGGGAGCCAACACTGGCCCAACCCTGCTCCGGCACAGattaatcaataaacaaactCTGATTTGGAACACAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015468 False 916 mRNA 0.56 5 9973956 9979625
TU122412 True 1057 lncRNA 0.54 3 9974041 9986628

Neighbor

gene id symbol gene type direction distance location
AMCG00015470 NA coding downstream 64522 9899672 ~ 9909434 (-)
AMCG00015469 NA coding downstream 97442 9871748 ~ 9876514 (-)
AMCG00015454 NA coding downstream 204286 9756195 ~ 9769670 (-)
AMCG00015453 NA coding downstream 234641 9718458 ~ 9739315 (-)
AMCG00015452 rab1ba,LOC100695098,LOC103027853,LOC103373258,LOC101478491,LOC103148874,LOC107679256,LOC105022126 coding downstream 255876 9712438 ~ 9718080 (-)
AMCG00015477 NA coding upstream 10435 9997063 ~ 10003088 (-)
AMCG00015478 NA coding upstream 16508 10003136 ~ 10004260 (-)
AMCG00015486 NA coding upstream 97160 10083788 ~ 10100629 (-)
AMCG00015485 NA coding upstream 123767 10110395 ~ 10111184 (-)
AMCG00015487 NA coding upstream 135371 10121999 ~ 10128211 (-)
G98138 NA non-coding downstream 35634 9937076 ~ 9938322 (-)
G98012 NA non-coding downstream 267925 9705727 ~ 9706031 (-)
G98006 NA non-coding downstream 292274 9681165 ~ 9681682 (-)
G97861 NA non-coding downstream 444803 9114016 ~ 9529153 (-)
G97906 NA non-coding downstream 589832 9383508 ~ 9384124 (-)
G98163 NA non-coding upstream 39486 10026114 ~ 10075893 (-)
G98211 NA non-coding upstream 120605 10107233 ~ 10165397 (-)
G98216 NA non-coding upstream 186473 10173101 ~ 10222525 (-)
G98314 NA non-coding upstream 502951 10489579 ~ 10493106 (-)
G98399 NA non-coding upstream 721793 10708421 ~ 10708752 (-)
AMCG00015471 NA other downstream 77444 9878459 ~ 9896512 (-)
G98094 NA other downstream 134446 9837502 ~ 9839510 (-)
AMCG00015460 NA other downstream 158490 9808818 ~ 9815466 (-)
G97897 NA other downstream 618224 9353217 ~ 9355732 (-)
AMCG00015419 klc2,LOC107747958,LOC107728029,LOC106578016 other downstream 789550 9174843 ~ 9184406 (-)
AMCG00015479 NA other upstream 32136 10018764 ~ 10026019 (-)
AMCG00015497 NA other upstream 202214 10188842 ~ 10193858 (-)
AMCG00015493 zbtb3,LOC107602571 other upstream 208936 10195564 ~ 10198654 (-)
G98269 taf6l other upstream 301398 10288026 ~ 10340868 (-)
AMCG00015501 NA other upstream 391657 10378285 ~ 10385379 (-)

Expression


Co-expression Network