AMCG00015477


Basic Information

Item Value
gene id AMCG00015477
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9997063 ~ 10003088 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015477
ATGGAGCCCCCGCCCCTCCGCCTGCTCAACTCTTCCTCCCCCCACCCCGAGCCGGCCCCGTGCCCCCTGCAGCCCGCCCTGCCCCCCTCGGTGCAGCTGGGGGTGACGGTGCTGTACACGGTGCTCTACGGCGCCCTCTTCCTGCTGGTGTATGCCCAGCTCTGGTTGCTGCTGCTGTCGGGCTACAAGCGCTGGAGCTACCAGAGCGGCTTCCTGTTCCTGTGCCTGCTGTGGGCGGGGCTGCGCACCACCCTGTTCGCCTTCTACTTCCGGGACACGCTGGCGGCCAATCACCTGCCAGGCCTCGCCCACTGGCTGCTGTACTGCTGCCCGGTGTGCCTGCAGTTCTTCACCCTCAGCCTCATCAACCTCTACTTCACACAgGTGGTGTTCAAAGTGAGAGGGAAGTTCAGCGCTGAGCCCACTCGAGGCCTCGCAGTGTTCCTGAGTGTGAACGTGGTGTGCGCGGCGCTGGGGGGGGCGGGCTGGCGGCCGGTGCTGGTCAGGGTCCTGGTCAACGATTCACTCTTCATCCTGGAGGCCGTGGCCCTGGCTGCCTCCCTCCTCATCCTCACCCGCCTCGCCCCCCACACCAGCCTCTTCCTGCAGACACAGgggacATCAGTGTGTCAGACAGCGGTGCTGGGTGTGGGTGTAATCCTGCTGTTCTCCAGCAGGGCATGCTATAACCTGGCTGTGCTGGTGCTTTCCCAGAGCCGCAGGGTGGAGGCCTTTGACTACGACTGGTACAACATCTCTGACCAGGCGGACCTGCGCAGTGATCTGGGGGATCGGGGGTACCTGGTGTTCGGCCTGATCCTGCTGGTTTGGGAGCTGCTGCCCACCGCTCTGCTTATCGGCATCTTCAGAGTGCGCCGCCCCCCCCGTGACGACggCTGCAGTCCAGTGATAAACAGTCGTGGGCCACGATCCTATTTCTTTGATGACCCtcgggggggaggggagagcgAGCCGGGGGCCCCCTGGGGACACACACCAGCTCCCCCGCCCAGctggCACAGCTCTGGTGACGCCGTCTGGTTTGGCTCCAGTGAGACGGCGCCGCTGCTCTTTGCTAGGGAAAACCAACAGACCAATCAGCATCACTCCCTCTACTCCACCCCCCAGAACTGACCAATCGCAGTCGCAGCCTCTTTGCTTCATTCCGCAAGAACCAACCTACGGCAAGCCAGTCTGTATTGCACTTCACCCGAGAGCCGCCCGATCACGGCGAGGATCTCTGCTCTCACCCCCTGAACACTGTCAGACAGTCGCATTCCCAGCCTGCACTCCTTTCAGAGCCAGCCATTCGGAGCCAGTCTCTGCATAACTCCCATCGCAgcaccctccccacccccaaacaCTTTCCAAACCCTGCAAGGCTCTGCAACTCCACCATTCAGAACTGACCaatccatccagagaaaaaaTGTATCAGCAATGGTGGAACCTATCACCTCCTGGCAAGCACTCCTACCAGCCAATCAGCTGAGAGCGAGGAACCACCCATCACAGGAAGGCTGCCCAGCACGGTGCCTACGGGGTACAATACCCTGGAGCCATGGATTCTGGAGGGGCAGCTGCCACACTTACCCTCTTCAACTGGTACCCTTCCCTTGTCCTGGGAACTGACAAATCAGGGCAAAGTTCTCCACTCCCTACCCACAGAACAGGGCTTTCCCATCCAGAGTCTCAACTCCTTTCAGAACTGACCAATCGCAGCGAGCGTCTCCAACCCCACCCACCTCAGAACTGGGTCAGGAGAATGGACTGCTATTTCTCTTCACAGCATTCGGGTGAAGATTTCCAGTGTGTATTTaatcagatttatattttatacacgtTCGTGGAACGAGAGAAAGTCTCCCATTCCCTAAATTTGCACTGTTACTTTGTTGTTGtcgtaaaatatatgtatttatatgcatcATTATACATGTTAAATGATAAGGGATTTTGATGAAGCTCAGGGTTCTCTGTAAAAATGACCAATGGTCCCTATAGGGAGTGTATACAGTGTCTGGAGTCTGTACAGGCATCTATACAAGTTCCAAAGTCAACACAGAGAGCAATGGTCCCCAGCCCTGCTTCCTAGAGAACCCCctcccctgctggtttttgttctgagcgtttaattacttaattgaaccttaaccATCTGCTTAGttatgactttttaaattgtgtaataagagttggttctttaaacAATTCTTAAACTTAAAACCCctatggtttaaaataattaaaagactctgatttaggaaattagttcaattaagcgAGAggtcagttggaacaaaaaccagcagagtaggggCTCCTCTAGAAGCAGGGTTGGGGACCCTGGACTCCGAGGACTCATAGGCCAGTAAAGATTGGGGGAGGATCCCCCTATATAATAAATACCTATGAATGTCATTGTATAGGAATTAACGCTTCTGCCTTACAGTTTATTAATAGTTACTTTTAAGATTACCATAggcttttaataatatttaaggAAACTATATGAAGTCAATAAATCCATTAACCCAATTAAA

Function

GO: NA

KEGG:

id description
K22989 GPR137; integral membrane protein GPR137

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015477 True 2543 mRNA 0.54 7 9997063 10003088

Neighbor

gene id symbol gene type direction distance location
AMCG00015470 NA coding downstream 87629 9899672 ~ 9909434 (-)
AMCG00015469 NA coding downstream 120549 9871748 ~ 9876514 (-)
AMCG00015454 NA coding downstream 227393 9756195 ~ 9769670 (-)
AMCG00015453 NA coding downstream 257748 9718458 ~ 9739315 (-)
AMCG00015452 rab1ba,LOC100695098,LOC103027853,LOC103373258,LOC101478491,LOC103148874,LOC107679256,LOC105022126 coding downstream 278983 9712438 ~ 9718080 (-)
AMCG00015478 NA coding upstream 48 10003136 ~ 10004260 (-)
AMCG00015486 NA coding upstream 80700 10083788 ~ 10100629 (-)
AMCG00015485 NA coding upstream 107307 10110395 ~ 10111184 (-)
AMCG00015487 NA coding upstream 118911 10121999 ~ 10128211 (-)
AMCG00015495 NA coding upstream 197692 10200780 ~ 10211282 (-)
G98138 NA non-coding downstream 58741 9937076 ~ 9938322 (-)
G98012 NA non-coding downstream 291032 9705727 ~ 9706031 (-)
G98006 NA non-coding downstream 315381 9681165 ~ 9681682 (-)
G97861 NA non-coding downstream 467910 9114016 ~ 9529153 (-)
G97906 NA non-coding downstream 612939 9383508 ~ 9384124 (-)
G98163 NA non-coding upstream 23026 10026114 ~ 10075893 (-)
G98211 NA non-coding upstream 104145 10107233 ~ 10165397 (-)
G98216 NA non-coding upstream 170013 10173101 ~ 10222525 (-)
G98314 NA non-coding upstream 486491 10489579 ~ 10493106 (-)
G98399 NA non-coding upstream 705333 10708421 ~ 10708752 (-)
AMCG00015468 NA other downstream 10435 9973956 ~ 9986628 (-)
AMCG00015471 NA other downstream 100551 9878459 ~ 9896512 (-)
G98094 NA other downstream 157553 9837502 ~ 9839510 (-)
AMCG00015460 NA other downstream 181597 9808818 ~ 9815466 (-)
G97897 NA other downstream 641331 9353217 ~ 9355732 (-)
AMCG00015479 NA other upstream 15676 10018764 ~ 10026019 (-)
AMCG00015497 NA other upstream 185754 10188842 ~ 10193858 (-)
AMCG00015493 zbtb3,LOC107602571 other upstream 192476 10195564 ~ 10198654 (-)
G98269 taf6l other upstream 284938 10288026 ~ 10340868 (-)
AMCG00015501 NA other upstream 375197 10378285 ~ 10385379 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location