AMCG00015496


Basic Information

Item Value
gene id AMCG00015496
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10253692 ~ 10259089 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015496
ATGAGTCAGACCATTTACATGGGGGGTGTGCTAGTTGGCGCCATGATCTTTGGGGGGCTGTCTGACAGgtttgGCCGGCGCTTCCTGCTCCTGTTCTCTCACCTGCTGATGGCAGTCATTGTGGAGTGGATTCCCACACAAATCCGCACAATTGTGGGCACAGGGACCGGCTACTGCTACACCATTGGCCAGCTGGTCCTGACAGCGGTGGCCTACAGCATCAGAGACTGGCGCTGGCTCACCCTGGCCGTCTCCCTGCCCTTCTACGTCTCCTTCCTGTACTcctgGTGGTTGGTGGAATCGGCGCGCTGGCTGGTGCTGAATGGGAAAGAAGACGTGGCCGTCAAGAACCTGCACAGGGTGTCTCGCATCAATGGCCGCAAAAAGGAGGGGAAGAAAATCACCCCTGAgAAGTTTGGCGTCGATATCTACCTGATCCAGGTCATCTTCAGCTGCGTGGACATCCCCGCCAAGTTCATCACCACAGTGGTCATGGCACTGCTGGGGAGGCGGCCCTCGCAtcagAATGGTATGGGCTGGGTGTCTACGATGGCGCGGATCGGGTCTATGGTCGCTCCTATGGTGCTGTTGTTAGGGGATCTGCTGCCCTCGTTGCCGGGGCTGATCTACGGAGGGGCGCCCTTCGTGGCCGGAATCTTCGCCCTCTTCCTGCCGGAGACGCTGGGGCAGCAACTGCCCGACACCATCCAGGACGTGGAGGAAAGGTTTGCAGGGCGGGGCCCCAGCGATGTCCCACCCATAGAGGAGGAGCTTGTGCTGAAGGAGGTCAAAAATTCGCTGATGAAGGAAGCCATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015496 True 819 mRNA 0.59 7 10253692 10259089

Neighbor

gene id symbol gene type direction distance location
AMCG00015495 NA coding downstream 42410 10200780 ~ 10211282 (-)
AMCG00015487 NA coding downstream 125481 10121999 ~ 10128211 (-)
AMCG00015485 NA coding downstream 142508 10110395 ~ 10111184 (-)
AMCG00015486 NA coding downstream 153063 10083788 ~ 10100629 (-)
AMCG00015478 NA coding downstream 249432 10003136 ~ 10004260 (-)
AMCG00015494 NA coding upstream 8850 10267939 ~ 10270312 (-)
AMCG00015499 NA coding upstream 38954 10298043 ~ 10334137 (-)
AMCG00015500 zdhhc24 coding upstream 94120 10353209 ~ 10355965 (-)
AMCG00015507 kat5,LOC106603125,LOC106563454 coding upstream 135355 10394444 ~ 10404856 (-)
AMCG00015506 drap1 coding upstream 172709 10431798 ~ 10437010 (-)
G98216 NA non-coding downstream 31167 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 88295 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 177799 10026114 ~ 10075893 (-)
G98126 NA non-coding downstream 235823 9929562 ~ 10017869 (-)
G98138 NA non-coding downstream 315370 9937076 ~ 9938322 (-)
G98314 NA non-coding upstream 230490 10489579 ~ 10493106 (-)
G98399 NA non-coding upstream 449332 10708421 ~ 10708752 (-)
G98510 NA non-coding upstream 884429 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 1288546 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 2186909 12445998 ~ 12446953 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 55038 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 59834 10188842 ~ 10193858 (-)
AMCG00015479 NA other downstream 227673 10018764 ~ 10026019 (-)
AMCG00015468 NA other downstream 267064 9973956 ~ 9986628 (-)
AMCG00015471 NA other downstream 357180 9878459 ~ 9896512 (-)
G98269 taf6l other upstream 28937 10288026 ~ 10340868 (-)
AMCG00015501 NA other upstream 119196 10378285 ~ 10385379 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other upstream 396096 10655185 ~ 10704395 (-)
AMCG00015524 NA other upstream 584596 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 753561 11012650 ~ 11237850 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000006_02634636_02643446 SLC22A6L coding CI01000006 null 2634288 ~ 2643446 (-)