AMCG00015500 (zdhhc24)


Basic Information

Item Value
gene id AMCG00015500
gene name zdhhc24
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10353209 ~ 10355965 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015500
GCAGTGTTTACGGCGACACCTTGATTTTATTCATTCGTTACACACCGAGGGGATGCATCTAttataaaaattattattattattattattattatttgacatTAGCACAGTAACAGAAGCGTAGAGTgcgggtgggtgggtgtgtagTTTCATTCACCGATCGGAGTCCACTTTTACGGAACACGCAGGGTTTCCTATTACGCCTTCCGCCTTCGTTCATTCATTTTTGGGGTTAACCTATTTGAcgaattgtattttgaaatattctgTATTGACTATTCATTTGTACAGGAAAGTTATAGCTAGGTCTCTGTGGCCGAGTCTGTTGCGTTGACGTCACACACCCTTCGAATTCATAATTCCAAATATGAATTCATACTTTGAAATACATAGATTCAATTGAGTGTGAATTAAATTAGCATAGGCTACACTGTGATGACAGACCATTGTGTGTGACGACAAGCGTTGCTGAAGAGGGAAACACACTTTGCGCTTCAGTCCAGTAGTTCGTTTTCCCGGCGCGTATTGACTGCGGGCAGACCGCGCACACACCGGGACGGCCGCAGCAGCACGATGGGCTTCCTCGGCCGGGCAGAGAGGGTGTGTCGCTTCATGCCCATCGTGGTCAACACGGTGCTCGTCCTGTCCATCACGGCGGAGGTGAGCTACCTGGTGGTGGTGGAGGCGCCGCGGGAGCCGGGGCAGCAGCGGGGCGAGTGGAGCGCCGTGTGGAAGGCGGCGCACCTGGGCGCGCAGTACTTCATGCTGGGCAACATCGTGTGGAACGCGTCGCTCTTCCTCCGCACTAGCCCCAGCATCCGAGGGGTGTTCCTGGGCAGCGATGGGGTGGGGCAAGGCTGGAGGTACTGCTACAGCTGTGAGAGCCACACCCCCCCGCGCTGCTCGCACTGCTACGACTGCAAGGTGTGCGTCCTGCGGCGCGACCACCACTGCGTCTTCTTTGGCCAGTGCGTGGGCTTCCGCAATTACCGCTACTTCCTGAGCTGCCTGCTGTTCATGTGGGCGGGGCTGCTGTATGCCGTGGTGCTCAATGCCGAGGTCTTCTTGGTCATCCTGAAGGAGGGGGTCACTCTGCACAGCTTCATGCTGCTGCTCGTCCCCTGGATCATGCTAGTGACAGCGAGGGCGTTTGCGTTCGCCTTCATCGCGGACACCTGCGTGGTGGGCTTCCTGCTAGTCGCGGCCTTCCTGTTCTTCCACGTGGTGCTGATGCTGCGTGGCCAGACCACCCGTGAATGGTACTCCACCCGCCGGCCCTACAGCCTGGGCTGGCGCCGCAACATCAGCGAATGCCTGGGCCAGCGCTGGTACCTGGCCTGGCTTTgccccctcatcccctctccgCTGCCCGGGGACGGTATCCACTTCCAGGTCACCGGTCCCCTCGATCAGGCCAACCCAGCCGTCCGGTAA

Function

symbol description
zdhhc24 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC24 (zinc finger DHHC-type containing 24).

NR:

description
PREDICTED: probable palmitoyltransferase ZDHHC24

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K18932 ZDHHC; palmitoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015500 True 1434 mRNA 0.56 3 10353209 10355965

Neighbor

gene id symbol gene type direction distance location
AMCG00015499 NA coding downstream 19072 10298043 ~ 10334137 (-)
AMCG00015494 NA coding downstream 82897 10267939 ~ 10270312 (-)
AMCG00015496 NA coding downstream 94120 10253692 ~ 10259089 (-)
AMCG00015495 NA coding downstream 141927 10200780 ~ 10211282 (-)
AMCG00015487 NA coding downstream 224998 10121999 ~ 10128211 (-)
AMCG00015507 kat5,LOC106603125,LOC106563454 coding upstream 38479 10394444 ~ 10404856 (-)
AMCG00015506 drap1 coding upstream 75833 10431798 ~ 10437010 (-)
AMCG00015508 NA coding upstream 94264 10450229 ~ 10460735 (-)
AMCG00015514 NA coding upstream 137175 10493140 ~ 10505219 (-)
AMCG00015515 bbs1,LOC107579588 coding upstream 174088 10530053 ~ 10538036 (-)
G98216 NA non-coding downstream 130684 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 187812 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 277316 10026114 ~ 10075893 (-)
G98126 NA non-coding downstream 335340 9929562 ~ 10017869 (-)
G98314 NA non-coding upstream 133614 10489579 ~ 10493106 (-)
G98399 NA non-coding upstream 352456 10708421 ~ 10708752 (-)
G98510 NA non-coding upstream 787553 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 1191670 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 2090033 12445998 ~ 12446953 (-)
G98269 taf6l other downstream 12341 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 154555 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 159351 10188842 ~ 10193858 (-)
AMCG00015479 NA other downstream 327190 10018764 ~ 10026019 (-)
AMCG00015468 NA other downstream 366581 9973956 ~ 9986628 (-)
AMCG00015501 NA other upstream 22320 10378285 ~ 10385379 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other upstream 299220 10655185 ~ 10704395 (-)
AMCG00015524 NA other upstream 487720 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 656685 11012650 ~ 11237850 (-)
G98502 NA other upstream 658660 11014625 ~ 11245562 (-)

Expression


Co-expression Network