AMCG00015523


Basic Information

Item Value
gene id AMCG00015523
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10798420 ~ 10803527 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015523
ATGGTGTTGGGCTCTCCAAGACCAGGGCAGGGATTGCCCAATATAGCACGCGCGTACGGGGGGAGAGGGGTGGCGGAGTGCGGCTCCTGCCCGGACAGTCAGCGCCTGGCCCGGCTGAGTGACGGTGTGGAGAGCGGGAGGAGCGTCTCCCTGCAGCCCGACTCCTGCGCGCCTCGGCTCGCCGCACCTGCAGCGCCGCCCGGTCCGGTCCGGTCCGGTCCGTGGAGGTCCAGCCGTCTCACCGCCTCTAGTTTGTTCTTTTCACCTCAGAGGACTAAGGTGGGACCGGTTTATAATCCGGACGGCAGCCCGCTGGACAGGTCAGTTCGAGGGGGTGTTGGGCTTGATCCAAACGGCCAGCCCTCATCAACCGGAGTCCTTCCCCACGGGACCGCACCGCCCGCCTCAGCCTGCCCTGCGAGAGAAGCGTTCTCGAGCAGCTACACGAAGACCAGCagtccccacccccccacctctgttAGTCAATCCACCACTCGGAGCCCCCCTACCCACCCCTGCCAAGGCAAGGATCTGTCCTGATTCTGTCCCTTCTGCTCCTGGAAAAACAGCTTCCTCCCCAGAgttagagaaagagagacagagatctataattcattaaaaatctGGAATAGCTtggttgatatttttttaaacttatcctctgatctgtgccttttgagagagagagagagagagagagagagagagagagatccatcTATCTTGTTCTATCTGAGGAGAAGTTTGTTGATATTCTAcatacatcaattaaataaattccttAAACTGATCATAGTGAGaattataatactttttttttttttatataaaacaaccacaaactaaatcaaaaccCTGGATTCTCTAGGCATGTCGGCCAAGGCGCCCATCTACCTGAAGCGGGGCAGCCGCAAGGGCAAGAAAGAGAAGCTGCGGGACCTGCTGTCGTCGGACATGATCAGCCCCCCACTGGGCGACTTCCGCCACACCATCCACATCGGCGGCAGCGGCGGCGAGGACGACGTCTTCGGGGACCTGTCCTTCCTGCAGGGCAAGTTCCACCTGCTGCCGGGCCGGACGGGACACAGCCTGTCCCAGCGCTCCAGCCAGTACGGCGAGCCCTTCCTCTTCACCCGCACCTCCAGCGTCTGCGGCCACCCGGGCAACGGCAGCCCCTGCGCGGACAGCTCCCCCCTGCTGAAGAACGCCATCTCTCTGCCTGTCATCGGGGGGGTGCAGGCCCTCACCCTCCCGTCCGCCCCAGCCCCCACCCCTCAGCCCTCCCCTCCCGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015523 True 1294 mRNA 0.59 3 10798420 10803527

Neighbor

gene id symbol gene type direction distance location
AMCG00015526 NA coding downstream 3152 10776830 ~ 10795268 (-)
AMCG00015518 NA coding downstream 162141 10634915 ~ 10636279 (-)
AMCG00015515 bbs1,LOC107579588 coding downstream 260384 10530053 ~ 10538036 (-)
AMCG00015514 NA coding downstream 293201 10493140 ~ 10505219 (-)
AMCG00015508 NA coding downstream 337685 10450229 ~ 10460735 (-)
AMCG00015525 NA coding upstream 7002 10810529 ~ 10816296 (-)
AMCG00015527 NA coding upstream 14152 10817679 ~ 10839852 (-)
AMCG00015531 actn3,LOC101158802 coding upstream 121334 10924861 ~ 10941495 (-)
AMCG00015530 NA coding upstream 173888 10977415 ~ 10985210 (-)
AMCG00015534 NA coding upstream 186355 10989882 ~ 10994885 (-)
G98399 NA non-coding downstream 89668 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 305314 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 575895 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 633023 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 722527 10026114 ~ 10075893 (-)
G98510 NA non-coding upstream 339991 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 744108 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1642471 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1644061 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1645769 12449296 ~ 12449821 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 94025 10655185 ~ 10704395 (-)
AMCG00015501 NA other downstream 413041 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 457552 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 599766 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 604562 10188842 ~ 10193858 (-)
AMCG00015524 NA other upstream 40158 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 209123 11012650 ~ 11237850 (-)
G98502 NA other upstream 211098 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 382333 11185860 ~ 11261168 (-)
AMCG00015540 NA other upstream 529136 11332663 ~ 11345490 (-)

Expression


Co-expression Network