AMCG00015525


Basic Information

Item Value
gene id AMCG00015525
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10810529 ~ 10816296 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015525
GCGGGCCGGGGGGGCCGGGGTGTCACGCTGCGGCCCCTCGGGGGTCCGGAGGAACCCCTGACCAACAGGTACAGGTTCATGTTCCAGAAACTCAGAGACGTCCGCGATGTGCTCTCAGAGCGGATCGAGGAGCTGGGCACCGAGCTGAAGACTCGCTTCAACATCGAGGAGTTCTCCTCTGTCTCCATGCCAGCACAGgACAGTGTGGCAGTGCTGGGCCAGGTGTGTTGTGACAGTAATGGGAAGCTCAATGCCCAGTCAGTGGTGCTGGAGGGGGAGCGGGAGCAGTCCAGCGGGGGCCGGGTGCCCCTGCAGCTGTCTGAGCTTCCGGAGTATTCGCTATTCCCTGGCCAGgtcgTGGTGTTGGAGGGCCTGAACACCACGGGCAGGAAGCTGGTGGTGTCCCGGCTGTACGAGGGGGTGCCTCTGCCGTTCCACACAGCGGAGGGGCAGCCAGAAGACACTGCGGCAGATGACCCTCTAATGGTGATGGTGGCCTGTGGCCCTTTCACCCCTTCTGACAGCCTGAACTATGAGCCCCTGCTGGACCTGATTGAAACCATCAACAGAGACCGTCCAGATGTCTGTGTGCTGcTGGGCCCGTTCCTGGACTCCAGACATGAGCAAGTTGAGAAGGGTCAGCTGACTGCGACGTTTGAGGAGGTGTTCCGGAAGTGTGTGCGGAGCGTCATCGAGGGGACGAGGAGtgTGCACACTCGTCTGGTTCTGGTCCCATCTCAGAGGGACGTGCAGCACCTCCCTGTGTACCCACAGCCTCCCTTCACCATCCCCGACCTCAGCAAGGATGACAAGGAGagggTGTGTCTGGTGTCTGACCCCTGCACTCTGCTGATCGGGGGCGTGGTGTTTGGCCTGACCTCCACAGACATCCTCTTCCACATGGGTGCCGAGGAGATCAGCAGCTATTACCCGTTGTACCCGCCGGCGGAGGAGGTGAACGTGGACTATGAGCGCTTCCTGTGGCATGCCCAGCTGCCCTGCACCCCTGACGTGCTCATCGTGCCCTCGGAGCTGCGCTACTTCATCAAGGATGTGATTGGCTGCGTGTGCATCAATCCCGGCAGACTGACCAAGGGCCAGGTGGGCGGGACCTACGGCAGGCTCCTCATCCAGGCCGGCGGCATCCCATTGGCTGAGGGAAAGAGGCAAAGCCCCTGCTTGGCTGGCCAGGTGGTGAAGATCTGACCCCGCCCCTAATAGACCCCTCCAAAATACCGTCTGGAGAAAACACCTAGAGACCCCAGCAGTCACCTGTGCCGTTTTGCCAATCACAGGCTGGGCTTGTGGGGCCCCATGACTGTTTCAAGAGaacctgtttgtgttttgttttgtgttctgtagttttgttttgttacatctCTTATCAACCTTAACAATCTTCTGAGCTTGAAGATGTCCTCAGTGAGGGAGTTGTTTGTGTTCTAATAAATGCAGAGTCCCAATCTGTACA

Function

GO:

id name namespace
GO:0006260 DNA replication biological_process

KEGG:

id description
K02321 POLA2; DNA polymerase alpha subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015525 True 1471 mRNA 0.59 12 10810529 10816296

Neighbor

gene id symbol gene type direction distance location
AMCG00015523 NA coding downstream 7002 10798420 ~ 10803527 (-)
AMCG00015526 NA coding downstream 15261 10776830 ~ 10795268 (-)
AMCG00015518 NA coding downstream 174250 10634915 ~ 10636279 (-)
AMCG00015515 bbs1,LOC107579588 coding downstream 272493 10530053 ~ 10538036 (-)
AMCG00015514 NA coding downstream 305310 10493140 ~ 10505219 (-)
AMCG00015527 NA coding upstream 1383 10817679 ~ 10839852 (-)
AMCG00015531 actn3,LOC101158802 coding upstream 108565 10924861 ~ 10941495 (-)
AMCG00015530 NA coding upstream 161119 10977415 ~ 10985210 (-)
AMCG00015534 NA coding upstream 173586 10989882 ~ 10994885 (-)
AMCG00015533 NA coding upstream 181253 10997549 ~ 11007375 (-)
G98399 NA non-coding downstream 101777 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 317423 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 588004 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 645132 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 734636 10026114 ~ 10075893 (-)
G98510 NA non-coding upstream 327222 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 731339 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1629702 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1631292 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1633000 12449296 ~ 12449821 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 106134 10655185 ~ 10704395 (-)
AMCG00015501 NA other downstream 425150 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 469661 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 611875 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 616671 10188842 ~ 10193858 (-)
AMCG00015524 NA other upstream 27389 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 196354 11012650 ~ 11237850 (-)
G98502 NA other upstream 198329 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 369564 11185860 ~ 11261168 (-)
AMCG00015540 NA other upstream 516367 11332663 ~ 11345490 (-)

Expression


Co-expression Network