AMCG00015526


Basic Information

Item Value
gene id AMCG00015526
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10776830 ~ 10795268 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015526
ATGGAAGGAAAGACAGTGGGGAAGGGACAAATTCAGAAGGGGGGgcacAAACCAGGATCACTTCCTCTCCCTGAactctgttttttctctcctaGTCCAACCAACCCCACCTCCCCACACGGGTTGACCTCAGGCAGCCTGCGCGCAGCCGCAGTGCCGCTCACTCGAGAGTGTAGGCGAACCAAGATGGCGGCTGTTGTGGAGAATGTAGTCAAACTACTAGGGGAGCAGTACTATAAAGACGCTATGGAGCAGTGCCACAACTACAACGCCCGGCTGTGTGCGGAGCGGAGTGTCCGCATGCCCTTTCTGGACTCTCAGACCGGCGTTGCCCAGAGCAACTGCTACATCTGGATGGAGAAGAGACACCGGGGCCCAGACGGCAGCAGCCTGGAGGCCCTGCTGAAGGCTGAGCCCCTGGACAAGCGCGGTGCCCCGGAGCCCCGTGGCCCCGAGGAGGATCCCAGTCTGGCTGATTTTGCCGGCGGGGGGGCCATTGCCGCAGCTGCCGCCCGCGCCAGGAAGAGGATCCTGGAGCCAGAGGACTTCCTGGACGACTTGGATGACGAAGACTACGAGGAGGACACGCCGAAGAGGCGAGGGAAGGGCAAAGGGAAGGGCCGTGGTGTGGCCAGCGCCCGCAAGAAGCTGGACGCTGCAGCGGCGGCACTGGAGGACCGAGACAAACCCTACGCCTGCGACATCTGCGGGAAGCGCTACAAGAACCGCCCGGGGCTGAGCTACCACTACGCCCACTCGCACCTTGCAGACGAAGAGGGGGAGGACAAGGAGGACTCGGAGCCCAGGACCCCCATCCCCACTCGCTCCGAGGAGCAGAAGTCTAAGAAGGGTCCTGACGGGCTGGCCCTGCCCAACAACTACTGCGACTTCTGCCTGGGAGACTCCAAAATCAACCACAAGACCGGCCAGTCGGAGGAGCTGGTGTCCTGCTCAGACTGCGGCCGATCGGGTCACCCGTCCTGCCTGCAGTTCACCCCGGTCATGATGGCTGCAGTGAAGACCTATCGCTGGCAGTGCATCGAGTGCAAGACCAGCTGCTGTTCTGCGATGACTGTGACAGAGGGTACCACATGTACTGCCTCAGCCCACCCATGGCTGAGCCCCCCGAAGACAAGGCCTCCATATATCAGAACCAGAACGCCCCCCCGTCGTGATGCGATCTCTGCCCCGCCccgcagcccccccacccccttcctcaCCTGCAGACccacacagagggagggaggacaCCAGTACTGCCCCTCCCCCCACCGGTACAGGGACGGGTGA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015526 True 1290 mRNA 0.63 12 10776830 10795268

Neighbor

gene id symbol gene type direction distance location
AMCG00015518 NA coding downstream 140551 10634915 ~ 10636279 (-)
AMCG00015515 bbs1,LOC107579588 coding downstream 238794 10530053 ~ 10538036 (-)
AMCG00015514 NA coding downstream 271611 10493140 ~ 10505219 (-)
AMCG00015508 NA coding downstream 316095 10450229 ~ 10460735 (-)
AMCG00015506 drap1 coding downstream 339820 10431798 ~ 10437010 (-)
AMCG00015523 NA coding upstream 3152 10798420 ~ 10803527 (-)
AMCG00015525 NA coding upstream 15261 10810529 ~ 10816296 (-)
AMCG00015527 NA coding upstream 22411 10817679 ~ 10839852 (-)
AMCG00015531 actn3,LOC101158802 coding upstream 129593 10924861 ~ 10941495 (-)
AMCG00015530 NA coding upstream 182147 10977415 ~ 10985210 (-)
G98399 NA non-coding downstream 68078 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 283724 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 554305 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 611433 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 700937 10026114 ~ 10075893 (-)
G98510 NA non-coding upstream 348250 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 752367 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1650730 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1652320 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1654028 12449296 ~ 12449821 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 72435 10655185 ~ 10704395 (-)
AMCG00015501 NA other downstream 391451 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 435962 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 578176 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 582972 10188842 ~ 10193858 (-)
AMCG00015524 NA other upstream 48417 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 217382 11012650 ~ 11237850 (-)
G98502 NA other upstream 219357 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 390592 11185860 ~ 11261168 (-)
AMCG00015540 NA other upstream 537395 11332663 ~ 11345490 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017386 dpf3 coding NC_007131.7 CM002904.2 28434196 ~ 28501429 (+)