AMCG00015530


Basic Information

Item Value
gene id AMCG00015530
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10977415 ~ 10985210 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015530
aatcagcaggggatcaaatacttttttcccccactgtatgtgctGGAGACCACCAGTATTAATCAATAACAAGCATTTTATCCAGTCTTCCATGTTATCAGGGCATTTACGGAGTTAATAATTGAGAGTTGGCttaattaagtgtttgtttGGCATTGATTGTAAAGAGTGCTGATCTACCAGACGTCCAACTTAGATCTGCGCTAGCCCCCCGCAACAACTTAACGCGTGTCGCCTATTGACATACTGTTTATCTATAAACGGCTTTATTCAAACCCCAGGTGAACCTcccccctttctccagacatggACAAGAGCAACACGGTGAAGATTTTCGTGGGGAACCTGGCGCTGGAGACCTCCCAGGAGGAGCTGTCTGCCATCTTCGAGCCATATGGCACCGTGGTGAGCTGCAGCGTCCTGCGGCAGTTTGCCTTTGTGCACCTGGCCGGCGAGGCAGCGGCAGCCCGGGCCATCGAGGAGCTGAATGGCCGCGAGTTCCGTGGCAGGAACCTGGTGGTGGAGGAGTCCAGGGGCCGGCCACTGCACTCCACCAAGGTCTTCGTGGGCAACCTGAGCGGCATGTGCACGGCCGAGGACCTGCAGGAGCTCTTCCAGACCTTCGGCAAGGTACTGGAGTGTGACAAGGTCAAAGGTTGCAACCAAACTAGCGCAATGGGAAGACAGCTAGCACCATCCGCAAACAGCAGAGTACCACAACGTTACGCCTTCGTCCACATGGAGAACAAGGAAGACGCGCTGCAGGCAATCGAGGCTCTGCATGGCACCTCCTTCAAGGGACGCCCGCTGTCTGTGGAGCTGTCCAAGGTGCAGCCCAGCAAGCAGGGACCTACAGGCAAGATCCCCTGCGTGAGCTGTGGCAAGCAGGGCCACTACGCGGGCGAGTGCCCCCTGACCAAGCCCTCGCTGGAGCAGTACCAAAGCCAGGCGGCTGTAGTGGCCGCTGCAGCAGCCGCCGCTGCAGGACTCCCCCTGCAGGTGCAGCAAAGTGTGCACAACTCGGTCTACAACACCCCCGTCTTCGACCCCACCTATGCGGCGCTCAGCGGCCTGTCGGCGGCCATCGGCTCGGACGGCAACCCAGTGAGCCCAGCCGTGTACGGGGCCCTCGCCAGCCAGGTGTACGGCACGGTGGCCAACCAGCTTTACAGCACACCAACCAGCCAGGCCTTGACCACAGGAGCCAGCCAGGTGTACAGCCCAGTCGCCAACCCCGCCTACAGCCAGGTGGCCAACAACACGGCAGCCGCAGCAGCTGTGGCAGCcgctgctgccgccgccgccgcctaCAGCGGCCAGGTGTACCCGCCGGGTGTGGGACCGTACATGAGCAACCCTGCGGGGGAGACACCTGCAGCCTCCGCCGCAGTGACCCCAGCCTACAGCGTGGCGCCAGCCCTGTACAGCGCCGGAGGGGGTGTGTCGGTGTACGGAGCGGTGGCGGGCTCCGACCCCACAGCCCAGGCTATCTTCGAGGCGGCGCGGGCACACTACTTTGCGCAGGGGCAGCAGGTCCTGGCCGAGCAGCAGGCGGGCTCTGCCTCCTCCAAGTCAGGGGACCGAGACCGCAGCCCTGTGCGCCGCTCAGGCCCACTCCTTCCCGACCCGCTGCCCAAACCCTACCTCTACCAGCGGCCCAAGCGCAGAGCCCTCCTGCCCACTCCGACCAGCCGGCCCGAGGACGCCGTGGCCACGGAGGAAGACCCCTTCGCCAGGTACTACGCAGAGTATTACCAGCAGTACCAGTCCCAATACCAGTCCCAGTACCAGTACCCACCTCAGTACCAGTACCCGTACCCGTACCCATCGCCAGCTGCAGTCCCCGCCGTCCCCGCCGTCCCGGCCCCCTCCTCCAGTCCCCTGGAGGCCCAGCAGCTGGCCGCACCCAGAGCGTATGAGCCGCCGCAGCCGCCGCCGCGCAAGGAGCCCCTCCTCCGCCGCCCCGACCTCCCCCCCCAGCACACGCCGGAGCCCCCCTTCCGATAACCGCCGTCCGCCTCCTGGAGGGActgtgtgtacgtgtgtctGGCCGCCGGTGTGTTTGAGGAGGGGGATAGGGGAGTTGGGATGTggctgtctgtttgtctgtctgtctgtctgcctgctcTGGAGTTGACCAGTTTCCAACCTTGGTTGCCTCTGGGCCTCCCCCAGCCAAACACACCCTGGCAGTCCAGCCCTGGTTTAAAACAATCGAGCTGCTGTTTGCTTTTGTTGGAAGAGGAAACATATAGTGGTTAGTTTCTTAGAACCTCTTGGGTATTCAAGTACCTTCAGGATTGCAGATGGGAGCTTCTCCCTTGTATTGACCTTGAGTTGTTACAATTAGTTTAAtattggtggggggggggggggggggggggggggggttacaacTGCACACAAGCCTTCAGTAGCCTTACTCCTAGGATTTCTTACATCGGGTTCAGtttccaattaatttaaaatggggTGGGTTAGGGTTTATGCAATCACACAAACCTTGGTCTCAGCCTTactcctatttttttttttcttacatcaggttgaatttaaaattaatttaagatgGGGGAGGCGGGGGTTATGCAACcatacaaatgcaaacacaaactTTCGGCACAGCCTTCCTCCTAGGATTCCTTACATCAGGTTCGGTTTACCCTGGGGTGCGGTGGGGCAGGTTCATCATGTgttgtgctttaatttcaacTTTTGAAAGTGGGCTTGCTCTGAACATAGTGtgagtgcagttttttttttttactttgatttaGCCTAGTCCACAGTATTTGAGCTTCATCGTTTTGTCCAATCTACACATGGTATTGAGAAGTTTTCTTGGTTTGGTTTGGAGGTGAATACCTTCATGTGGACTTTGAAGGCGATAGACCGTGTTCCTCACCAGCTGTGTGGTTACAAGTCACAGTTCTCTGTACCAGGCTGTGGTGTGGTtgggaccagggttggacagtcttggtatgtttgtgtgtgtctgtgtgtgttttgaatgaGGGGGTAAAGGTGCTTCTAAAGACCCAAATCCAAGAGTACATAAAGCCCCCAGCTCCAACTCTCACGACGACTGCGAATGCATTGAGCTCTCCCACAACATCCAACACACCGCCACCCCCGGAACGCTGACAGAAATTTGTTCCCCCCCCAACGCCTTCTCCATCTGGGGTGTAGTCACGGGTGTAGTGCATCAGGAGACATTAGACTTGGAGATTTGGTGCAGCCAGACAATACTTTGGTAAAATGTTGTCCAAACCACACTGGCTGTAGCAGTGGGGCTGAAAATGCTCAGTCTCTTTCTTACTACCCAAATGGCAGCATCatgcaggttttgttttggcatTCGTGACTTTTACCCCTCTTCTAGAGTACAGACCATAATTCGCTAACGACTTTTTGCCCGTGTCTCGTACCATGTCTCGCAAGTGTGAATAGCGATGTTGACTtatctatatttttaagttgttgttttttttattacaaatgtaaatgcgCTTTGTAAAAGGCACCCAAGCACAGGataggataaaaaataaaaataaataacgaaaGCAAGctaaaccttttctttttgcaaCTTCTCAAACAAGAAGAAATCTGTCTCAATGTTCCGTGTTATTTCGAGTCTGAGTTAGTGATAGTCATTGAACTTGATGACATACCAAAAGGGTCGGGGGTTTCAGATCAGGATTTGGCCCATACCCCAAATTCTGTGAGGTGCTGCAGCACCTTAACCCCTTGCGTGCTGAGCAAGGCAGGGGAACGGAGGTTTCTCTCAGTGTTCTACAGTGTCGCACCGCATCCTGACAAACCGGCCTGCGGACTTCAGCCCAGGTGCTCGTTTtaatttgcacacacacacacacgcacacactcgcaCCCTCTTTCTACCTCTCTCTCCATGCATTAGCTTTTGTTCATCTTTCTTCTTCAAATGCTATTATGCTGTCATCGCCATGTTGGGCAGTTCTGACATTGATACACAACAGCACATCTTTGCTTTTTATACATCTTCAATCCACCATCGCCTCCGAGACATCGATCTAATGCACTCTTGCCCTCTAGACGTAGTCCATTAGTGAATTGTCCAAGGAGTCATTCTTGTAGATATTGTgtatgttttcctttcctttttattttcatttttgaccTTACCCAACCATTGTTGAATTGGTCTATtcactatatattattattattatgggcaGGGAAGTGAGGATATTGTGCACATGTTTAAAGACAGatagactttttttcttttttgaggttctgtttattttttgttatgatcctttgtttttgttttttgccaatatatattttttaatgtactcgAAAATAAAGAATGTTCTGATCAGTATTATATATAGGGCttggattttgtatttttgtttattattatttatacatttatatcttCCAGCCATTTCTCGATTCTACAAGCGGGagaatggtatttttttt

Function

GO: NA

KEGG:

id description
K13189 RBM14; RNA-binding protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015530 True 4479 mRNA 0.52 4 10977415 10985210

Neighbor

gene id symbol gene type direction distance location
AMCG00015531 actn3,LOC101158802 coding downstream 35920 10924861 ~ 10941495 (-)
AMCG00015527 NA coding downstream 137563 10817679 ~ 10839852 (-)
AMCG00015525 NA coding downstream 161119 10810529 ~ 10816296 (-)
AMCG00015523 NA coding downstream 173888 10798420 ~ 10803527 (-)
AMCG00015526 NA coding downstream 182147 10776830 ~ 10795268 (-)
AMCG00015534 NA coding upstream 4672 10989882 ~ 10994885 (-)
AMCG00015533 NA coding upstream 12339 10997549 ~ 11007375 (-)
AMCG00015536 NA coding upstream 193882 11179092 ~ 11183890 (-)
AMCG00015541 NA coding upstream 286329 11271539 ~ 11322500 (-)
AMCG00015556 NA coding upstream 1477846 12463056 ~ 12469988 (-)
G98399 NA non-coding downstream 268663 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 484309 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 754890 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 812018 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 901522 10026114 ~ 10075893 (-)
G98510 NA non-coding upstream 158308 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 562425 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1460788 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1462378 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1464086 12449296 ~ 12449821 (-)
AMCG00015524 NA other downstream 127994 10843685 ~ 10849421 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 273020 10655185 ~ 10704395 (-)
AMCG00015501 NA other downstream 592036 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 636547 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 778761 10195564 ~ 10198654 (-)
AMCG00015532 NA other upstream 27440 11012650 ~ 11237850 (-)
G98502 NA other upstream 29415 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 200650 11185860 ~ 11261168 (-)
AMCG00015540 NA other upstream 347453 11332663 ~ 11345490 (-)
G98543 NA other upstream 368573 11353783 ~ 11386199 (-)

Expression


Co-expression Network